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  • The following steps can be used to read CCP4-format electron density maps into pymol for the generation of publication-quality images. If the ccp4 maps loaded by PyMOL seem smaller/larger than maps in other programs this might be due to normalization. To stop PyMOL from n
    3 KB (540 words) - 10:19, 5 June 2015

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  • ...acromodel files must end in ".mmod", XPLOR maps must end in ".xplor", CCP4 maps must end in ".ccp4", Raster3D input (Molscript output) must end in ".r3d",
    5 KB (824 words) - 09:15, 3 January 2018
  • [[Category:Maps]]
    667 bytes (98 words) - 04:56, 18 September 2020
  • ...to PyMOL from another tool, then it is definitely worth comparing how the maps are being represented by creating an equivalent figure in both, making sure [[Category:Maps]]
    4 KB (555 words) - 08:38, 1 October 2020
  • [[Category:Maps]]
    2 KB (276 words) - 15:50, 2 June 2021
  • ==Ray tracing maps== For better quality maps with a white background.
    1 KB (199 words) - 20:08, 30 September 2008
  • for example trim all your maps to 3 Angstroms around ligands with one [[Category:Maps]]
    826 bytes (126 words) - 16:31, 24 March 2010
  • for example trim all your maps to 3 Angstroms around ligands with one
    793 bytes (117 words) - 08:04, 15 August 2005
  • The following steps can be used to read CCP4-format electron density maps into pymol for the generation of publication-quality images. If the ccp4 maps loaded by PyMOL seem smaller/larger than maps in other programs this might be due to normalization. To stop PyMOL from n
    3 KB (540 words) - 10:19, 5 June 2015
  • DYN-MAP is a PyMol v0.99 plug-in that generates maps of functional groups present in a protein and visualize them using dynamic
    633 bytes (82 words) - 23:43, 4 July 2007
  • MAPS isomesh isodot
    2 KB (162 words) - 08:33, 20 June 2009
  • [[Category:Maps]]
    299 bytes (36 words) - 04:35, 1 July 2020
  • ...contact map images to the residues in PyMOL in a interactive way. Contact maps are pixel graphics where each protein residue corresponds to one line and o # This PyMOL Plugin Contact Maps Visualizer is
    4 KB (589 words) - 04:34, 17 November 2021