Search results

Page title matches

• Editing atoms
  [[Category:Modeling_and_Editing_Structures|Editing Atoms]]
  2 KB (350 words) - 16:49, 23 July 2012
• Editing set dihedral
  26 bytes (3 words) - 17:37, 6 March 2008
• Modeling and Editing Structures
  Unfortunately, much of the molecular editing stuff remains to be documented. Here's an example sequence, but I'm not sur Don't forget to switch to Mouse Editing mode.
  7 KB (1,076 words) - 19:49, 29 November 2015

Page text matches

• Protect
  '''protect''' protects a set of atoms from tranformations performed using the editing features. This is most useful when you are modifying an internal portion o [[Category:Editing Module|Protect]]
  1 KB (179 words) - 11:26, 24 January 2016
• Valence
  ...:PHE_delocalized.png|set valence, 1<br>#delocalized bonds<br>#see section "Editing bonds" below or try command "valence guess, all" == Editing bonds ==
  2 KB (330 words) - 14:51, 5 October 2023
• Invert
  The invert function is usually bound to CTRL-E in Editing Mode.
  299 bytes (39 words) - 14:42, 17 November 2009
• Unpick
  ...l "pk" atom selections (pk1, pk2, etc.) used in atom picking and molecular editing.
  287 bytes (37 words) - 14:44, 17 November 2009
• Molecular Sculpting
  # Configure the mouse for editing (''Mouse'' menu) or click in the mouse/key matrix box. # Now perform any conformational editing operation in the green region such as:
  2 KB (225 words) - 10:41, 19 October 2018
• Edit Keys
  ===EDITING KEYS === text editing functions instead (CTRL - A, E, and K, and DELETE), so
  2 KB (226 words) - 09:47, 20 June 2009
• Deprotect
  316 bytes (35 words) - 17:47, 29 January 2019
• Remove Picked
  '''remove_picked''' removes the atom or bond currently picked for editing. [[Category:Editing Module|Remove Picked]]
  490 bytes (63 words) - 14:49, 17 November 2009
• Cartoon oval width
  For editing the "length" of the ribbon see [[Cartoon_oval_length]]
  592 bytes (83 words) - 16:35, 16 May 2008
• Edit
  '''edit''' picks an atom or bond for editing. [[Category:Editing Module|Edit]]
  486 bytes (64 words) - 14:02, 29 July 2010
• Torsion
  '''torsion''' rotates the torsion on the bond currently picked for editing. The rotated fragment will correspond to the first atom specified when pic
  424 bytes (58 words) - 14:44, 17 November 2009
• Redo
  [[Category:Editing Module|Redo]]
  354 bytes (47 words) - 13:12, 29 April 2021
• OLD TOPTOC
  ## [[Modeling_and_Editing_Structures|Modeling and editing structures]] ### [[Editing atoms|Editing Atoms]]
  4 KB (451 words) - 12:14, 15 September 2008
• Mouse modes
  to edit the '''3-Button Editing''' mode.
  2 KB (184 words) - 10:43, 13 July 2010
• Mouse Controls
  For example, I don't think molecular editing is possible with a
  1 KB (158 words) - 06:19, 23 November 2010
• Attach
  [[Category:Editing Module|Attach]]
  582 bytes (75 words) - 13:04, 6 December 2021
• Python
  This is a helpful command for testing different scripting or state-editing strategies for movie making.
  1 KB (237 words) - 02:28, 12 February 2020
• TOPTOC
  # [[Modeling_and_Editing_Structures|Modeling and editing structures]] ## [[Editing atoms|Editing Atoms]]
  6 KB (682 words) - 07:03, 9 September 2010
• Commands
  EDITING create replace remove h_fill remove_picked
  2 KB (162 words) - 09:33, 20 June 2009
• Editing atoms
  [[Category:Modeling_and_Editing_Structures|Editing Atoms]]
  2 KB (350 words) - 16:49, 23 July 2012
• Stereo ray
  ...output_r.png". Just paste the two images next to each other (in some image editing program) and you're done.
  1 KB (211 words) - 11:49, 31 May 2012
• Modeling and Editing Structures
  Unfortunately, much of the molecular editing stuff remains to be documented. Here's an example sequence, but I'm not sur Don't forget to switch to Mouse Editing mode.
  7 KB (1,076 words) - 19:49, 29 November 2015
• Undo
  [[Category:Editing Module|Undo]]
  2 KB (272 words) - 22:09, 10 May 2021
• CavitOmiX
  [[Category:Modeling and Editing Structures]]
  3 KB (354 words) - 22:24, 23 December 2022
• Perp maker
  You can rotate and move the plane using the editing features (A > drag, Shift+Drag with right, middle or left mouse button).
  816 bytes (122 words) - 18:06, 9 December 2013
• Builder
  [[Category:Editing]]
  2 KB (333 words) - 14:34, 29 April 2021
• CreateSecondaryStructure
  # Pick atom for editing - interestingly only need to do this for the first addition
  6 KB (752 words) - 04:14, 27 November 2009
• Rotamer Toggle
  import editing editing.set_dihedral(sel + ' and name '+CHIS[at.resn][i][0],
  21 KB (2,661 words) - 04:04, 17 August 2010
• Outline
  In an image editing program, position overlay.png in a layer exactly overlapping base.png. The
  3 KB (466 words) - 01:13, 26 April 2023
• Gallery
  # the 3-Button Editing Mouse Mode
  21 KB (3,151 words) - 18:06, 10 February 2017
• Linux Install
  5 KB (713 words) - 05:48, 5 June 2020
• Ideas
  * Enable editing of displayed sequence alignments.
  17 KB (2,322 words) - 12:55, 8 October 2015
• Cealign plugin
  ...the last protein you were considering had more than one state and you quit editing that protein on a state that's not state 1). To fix this, use the rewind b
  22 KB (3,320 words) - 17:19, 29 September 2014
• Slerpy
  ...onvenient to edit this file rather than using saction over and over. After editing it by hand be sure to do an sread.
  42 KB (5,896 words) - 04:01, 1 March 2010