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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
New accounts: email jason (dot) vertrees (@) gmail dot com
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
New Plugin LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
Official Release PyMOL v1.8.0 has been released on Nov 18, 2015.
PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship
Official Release PyMOL, AxPyMOL, and JyMOL v1.7.6 have all been released on May 4, 2015.
New Plugin PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
Older News See Older News.
Did you know...

Plugin Manager

Since version 1.5.0.5 PyMOL comes with a Plugin Manager, which can be used to load plugins such as those in the PyMOL Script Repo.

Features

  • Install/Uninstall plugins
  • Disable plugins and load them on demand to optimize PyMOL's startup time
  • Configure the plugin search path

Appending additional paths to the Plugin Manager

Should your scripts be located in several alternative locations, it is possible to append additional directories to the Plugin Manager.

Plugin > Plugin Manager > Settings > Add new directory...

Screenshots

Plugin manager installed.png Plugin manager install new.png Plugin manager settings.png

See Also

A Random PyMOL-generated Cover. See Covers.