Difference between revisions of "Get raw distances"
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[[get_raw_distances]] can dump distance objects, created with [[distance]]. | [[get_raw_distances]] can dump distance objects, created with [[distance]]. | ||
| + | |||
| + | ''Warning: the atoms are hashed by coordinates; this could cause issues if coordinates are altered after distance objects have been created (see also [[dynamic_measures]] setting).'' | ||
== Arguments == | == Arguments == | ||
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* [[distance]] | * [[distance]] | ||
| + | * [[dynamic_measures]] | ||
* [[find_pairs]] | * [[find_pairs]] | ||
* [[get_raw_alignment]] | * [[get_raw_alignment]] | ||
[[Category:Script Library]] | [[Category:Script Library]] | ||
| + | [[Category:ObjSel_Scripts]] | ||
Revision as of 12:55, 1 February 2012
| Type | Python Module |
|---|---|
| Download | get_raw_distances.py |
| Author(s) | Takanori Nakane and Thomas Holder |
| License | BSD-2-Clause |
| This code has been put under version control in the project Pymol-script-repo | |
get_raw_distances can dump distance objects, created with distance.
Warning: the atoms are hashed by coordinates; this could cause issues if coordinates are altered after distance objects have been created (see also dynamic_measures setting).
Arguments
- names = string: names of distance objects (no wildcards!) {default: all measurement objects}
- state = integer: object state {default: 1}
- selection = string: atom selection {default: all}
Example
fetch 2xwu, async=0
# interface polar contacts
distance iface_hbonds, chain A, chain B, mode=2
# dump (model,index) information
get_raw_distances iface_hbonds