Jump to content
Main menu
Main menu
move to sidebar
hide
Navigation
Main page
Recent changes
Random page
Help
SBGrid Resources
SBGrid Consortium
SBGrid Data Bank
Software Webinars
PyMOL Webinar
PyMOL Wiki
Search
Search
Appearance
Log in
Personal tools
Log in
Main Page
Main Page
Discussion
English
Read
View source
View history
Tools
Tools
move to sidebar
hide
Actions
Read
View source
View history
General
What links here
Related changes
Printable version
Permanent link
Page information
Appearance
move to sidebar
hide
From PyMOL Wiki
Revision as of 19:12, 17 December 2025 by
Bene
(
talk
|
contribs
)
(
diff
)
← Older revision
|
Latest revision
(
diff
) |
Newer revision →
(
diff
)
hosted by
Welcome to the PyMOL Wiki!
The community-run support site for the
PyMOL
molecular viewer.
To request a new account, email SBGrid at accounts (@) sbgrid dot org from your institutional email address.
Quick Links
Tutorials
Table of Contents
Commands
Script Library
Plugins
FAQ
Gallery
|
Covers
PyMOL Cheat Sheet
(
PDF
)
Getting Help
News & Updates
New Setup
PyMOL-open-source-windows-setup v3.1
has been released on January 20, 2025. More information under
Windows Install
.
New Plugin
PySSA
aims to combine PyMOL and
ColabFold
to enable the prediction and analysis of 3D protein structures for the scientific end-user.
v1.0 has been released
on July 10, 2024.
Official Release
PyMOL v3.0 has been released
on March 12, 2024.
New Plugin
CavitOmiX
calculate
Catalophore™ cavities
, predict protein structures with
OpenFold by NVIDIA-BioNeMo
,
ESMFold
and retrieve
Alphafold
models
Official Release
PyMOL v2.5 has been released
on May 10, 2021.
Python 3
New
Python 3 compatibility guide
for scripts and plugins
POSF
New PyMOL fellowship announced for 2022-2023
Tutorial
Plugins Tutorial
updated for PyQt5
New Plugin
PICv
is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
Selection keywords
New
polymer.protein and polymer.nucleic
selection keywords. Thanks everyone who participated in the
poll
!
Plugin Update
MOLE 2.5
is an updated version of channel analysis software in PyMOL
New Script
dssr_block
is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News
See
Older News
.
Did you know...
Get colors
Type
Python Module
Download
scripts/get_colors.py
Author(s)
Andreas Warnecke
License
BSD-2-Clause
This code has been put under version control in the project
Pymol-script-repo
get_colors
contains two functions that can be useful when working with colors
get_colors
: returns all available PyMOL colors
get_random_color
: returns a random available PyMOL color
Note that basic colors can be accessed manually without this script from the PyMOL menu under
Setting
-->
Colors...
For instruction on setting up plugin import see
Git intro
or
Plugin Manager
1LSD colored randomly by residue
Usage
get_colors [ selection [, quiet ]] get_random_color [ selection [, quiet ]]
Examples
..→
A Random PyMOL-generated Cover. See
Covers
.
Categories
:
Pages using DynamicPageList4 Intersection parser tag
Pages using DynamicPageList4
Search
Search
Main Page
Add topic