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Welcome to the PyMOL Wiki!
| The community-run support site for the PyMOL molecular viewer.
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| To request a new account, email SBGrid at: accounts (@) sbgrid dot org
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News & Updates
| Official Release
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PyMOL v2.1 has been released on March 13, 2018.
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| Selection keywords
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New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
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| Plugin Update
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MOLE 2.5 is an updated version of channel analysis software in PyMOL
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| New Script
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dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
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| New Plugin
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LiSiCA is a new plugin for 2D and 3D ligand based virtual screening using a fast maximum clique algorithm.
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| New Plugin
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PyANM is a new plugin for easier Anisotropic Network Model (ANM) building and visualising in PyMOL.
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| New Plugin
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Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds.
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| New Plugin
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MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL.
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| 3D using Geforce
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PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards.
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| Older News
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See Older News.
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Did you know...
set_key binds a Python function or PyMOL command to a key press.
Such key binding customization is typically done with your pymolrc startup script.
Changes with PyMOL version:
- 1.8: decorator support
- 1.7: second argument can also be a string in PyMOL command syntax
PyMOL API
cmd.set_key(string key, function fn, tuple arg=(), dict kw={})
Also supported since PyMOL 1.7:
cmd.set_key(string key, string command)
Decorator support since PyMOL 1.8:
cmd.set_key(string key)(function fn)
PyMOL Command (since PyMOL 1.7)
set_key key, command
Examples
from pymol import cmd
# define a custom function which colors a selection blue
def make_it_blue(selection): cmd.color("blue", selection)
# color "object1" blue when the F1 key is pressed
cmd.set_key( 'F1' , make_it_blue, [ "object1" ] )
<source lang="python">
- zoom on everything
cmd.set_key( 'CTRL-C' , cmd.zoom ) ..→
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 A Random PyMOL-generated Cover. See Covers.
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