Difference between revisions of "Category talk:Script Library"

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= Requests =
 
= Requests =
 +
== Introduction ==
 
Please place your PyMOL script requests here.  A few other people might have the same request and someone might just code it up for free (viz. all these other scripts).  There are no guarantees that someone will write your script, but it doesn't hurt asking.
 
Please place your PyMOL script requests here.  A few other people might have the same request and someone might just code it up for free (viz. all these other scripts).  There are no guarantees that someone will write your script, but it doesn't hurt asking.
  
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:: Example text of what the new awesome script is supposed to do in PyMOL.  Consider posting some contact information, so once the script is posted you are apprised.
 
:: Example text of what the new awesome script is supposed to do in PyMOL.  Consider posting some contact information, so once the script is posted you are apprised.
  
 +
== List of Requested Scripts ==
 +
 +
'''Dang Reader'''
 +
:: It would be nice if PyMOL could read in and visualize the Dangle (http://kinemage.biochem.duke.edu/software/dangle.php) colon delimited output or be scripted to reproduce the actual data itself for visualization.
 +
 +
 +
==Instruction request==
 +
Would it be possible to add short instructions to category page for new users how to run scripts in pymol...(?)
 +
 +
Maybe this helps: [[Running_Scripts]] (I didn't dare to edit the nice yellow table :-) ) --[[User:Karo|Karo]] 11:19, 5 August 2010 (UTC)
  
 
= Policy =
 
= Policy =
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** Authors may maintain copyright
 
** Authors may maintain copyright
 
** Only post links to code that is not open source licensed, do not copy it onto the wiki
 
** Only post links to code that is not open source licensed, do not copy it onto the wiki
 
= General Notes =
 
== Notes ==
 
* Feel free to add scripts (see [[#Rules|rules]] below).
 
* Feel free to add new categories
 
* You can make script requests on this page's discussion page
 
* [http://github.com/jlec/Pymol-script-repo GIT Repository] of all our scripts: <source lang="python">git clone git://github.com/jlec/Pymol-script-repo.git</source>
 
 
== GitHub for Pymol-scripts==
 
I created a github for the pymol scripts. I think this is a good way to to collect and enlarge the collection of scripts. The repo is public accessible so contribute. If you need help on git just write me an email.
 
 
http://github.com/jlec/Pymol-script-repo
 
 
 
 
 
 
About the rasmolify script, there's a project to translate between the languages [http://arcib.dowling.edu/sbevsl/].
 
It's in pre-alpha, apparently, but this kind of language translation seems like a tricky problem. It's on my list of things to do...--[[User:Gilleain|Gilleain]] 19:27, 18 February 2008 (CST)
 
 
: To be honest I was thinking of a quick hack rather than anything fancy. Thanks very much for the pointer though! --[[User:Dan|Dan]] 02:45, 19 February 2008 (CST)
 
  
 
== Depositing Scripts ==
 
== Depositing Scripts ==
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 +
= General Notes =
 +
== Notes ==
 +
* Feel free to add scripts (see [[#Rules|rules]] below).
 +
* Feel free to add new categories
 +
* You can make script requests on this page's discussion page
 +
* [https://github.com/Pymol-Scripts/Pymol-script-repo GIT Repository] of all our scripts: <source lang="python">git clone git://github.com/Pymol-Scripts/Pymol-script-repo.git</source>
  
== Feedback on Changes ==
+
== GitHub for Pymol-scripts==
 +
I created a github for the pymol scripts. I think this is a good way to to collect and enlarge the collection of scripts. The repo is public accessible so contribute. If you need help on git just write me an email.
  
Please let me know if you like the new changes.
+
https://github.com/Pymol-Scripts/Pymol-script-repo

Latest revision as of 05:56, 3 December 2011

Requests

Introduction

Please place your PyMOL script requests here. A few other people might have the same request and someone might just code it up for free (viz. all these other scripts). There are no guarantees that someone will write your script, but it doesn't hurt asking.

ExampleScriptTitle

Example text of what the new awesome script is supposed to do in PyMOL. Consider posting some contact information, so once the script is posted you are apprised.

List of Requested Scripts

Dang Reader

It would be nice if PyMOL could read in and visualize the Dangle (http://kinemage.biochem.duke.edu/software/dangle.php) colon delimited output or be scripted to reproduce the actual data itself for visualization.


Instruction request

Would it be possible to add short instructions to category page for new users how to run scripts in pymol...(?)

Maybe this helps: Running_Scripts (I didn't dare to edit the nice yellow table :-) ) --Karo 11:19, 5 August 2010 (UTC)

Policy

Rules

We want the script library to be as valuable as possible to the public. Therefore, please follow these rules when posting code to the wiki:

  • Only post code if you have the legal right to do so
  • All posted code must be released under some source license or freer (public domain).
    • Authors may maintain copyright
    • Only post links to code that is not open source licensed, do not copy it onto the wiki

Depositing Scripts

  • Create a new page for your script
  • Please provide
    • an overview of what the script does
    • any usage comments or hints
    • the source code
  • Please add the following to the bottom of your new page:
    [[Category:Script_Library]] [[Category:PUT_SUBCATEGORY_NAME_HERE]]


General Notes

Notes

  • Feel free to add scripts (see rules below).
  • Feel free to add new categories
  • You can make script requests on this page's discussion page
  • GIT Repository of all our scripts:
    git clone git://github.com/Pymol-Scripts/Pymol-script-repo.git
    

GitHub for Pymol-scripts

I created a github for the pymol scripts. I think this is a good way to to collect and enlarge the collection of scripts. The repo is public accessible so contribute. If you need help on git just write me an email.

https://github.com/Pymol-Scripts/Pymol-script-repo