| Scripts & Plugins | 
| ♦ ToGroup — Converts a multistate object into a group of single state objects. | 
| ♦ FindSeq — Find sequence or regular expression of amino acids in a protein. | 
| ♦ Modevectors — creates arrow plots for normal mode analysis (NMA), NMR ensembles and other cases where you want to point out differences between similar objects. | 
| ♦ Pucker — finds the sugar pucker information (phase, amplitude, pucker) for a given selection. | 
| ♦ GetNamesInSel — find the names of all objects in a selection. | 
| ♦ CalcArea — find the area of any given object/selection; | 
| ♦ ConnectedCloud — find connected clouds of objects in PyMOL. | 
| ♦ MakeVinaCommand — Use PyMOL to create a valid command line for the new Vina docking software. | 
| ♦ DrawBoundingBox — Draw a bounding box around your selection. | 
| ♦ Locate loaded PyMOL objects that are nearby some other object with FindObjectsNearby. | 
| ♦ Ever wanted to load all the PDBs in a directory within PyMOL?  Now you can load all files in a dir with LoadDir. | 
| ♦  PDB Web Services Script — Example using PyMOL and the PDB Web Services. | 
| ♦  LigAlign — Ligand-based active site alignment and comparison. | 
| ♦ Added a simple script for finding the center or mass, or moving a selection to the origin. |