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This special page shows all uploaded files.
| Date | Name | Thumbnail | Size | User | Description | Versions |
|---|---|---|---|---|---|---|
| 21:53, 19 May 2011 | Ann.png (file) |  |
127 KB | Inchoate | 1 | |
| 23:44, 27 April 2011 | Depthmol.mpeg (file) |  |
6.85 MB | Inchoate | depth enhanced ambient occlusion-like movie | 1 |
| 12:38, 25 April 2011 | Tp ribbon.png (file) |  |
169 KB | Inchoate | transparent ribbons | 1 |
| 20:01, 24 April 2011 | Demo DSSP Stride plugin 1pyg.png (file) |  |
364 KB | Hongbo zhu | 1 | |
| 15:25, 22 April 2011 | Selection roundpts1.png (file) |  |
23 KB | Inchoate | round points on | 1 |
| 15:25, 22 April 2011 | Selection overaly1.png (file) |  |
21 KB | Inchoate | selection indicators overlay atoms | 1 |
| 15:24, 22 April 2011 | Selection overaly0.png (file) |  |
21 KB | Inchoate | selection overlays atoms (off) | 1 |
| 09:54, 20 April 2011 | Color by mutation.png (file) |  |
162 KB | Cmalisi | 3 | |
| 09:28, 13 April 2011 | Demo DSSP plugin 1pyg.png (file) |  |
390 KB | Hongbo zhu | Reverted to version as of 13:26, 13 April 2011 | 4 |
| 12:59, 11 April 2011 | Bg grad.png (file) |  |
153 KB | Inchoate | background gradient | 1 |
| 12:56, 11 April 2011 | Screen shot 2011-04-11 at 12.55.49 PM.png (file) |  |
153 KB | Inchoate | Example image with the bg_gradient set. | 1 |
| 02:12, 8 April 2011 | Shade.png (file) |  |
319 KB | Inchoate | ray_direct_shade on | 1 |
| 02:11, 8 April 2011 | No shade.png (file) |  |
363 KB | Inchoate | ray_direct_shade off | 1 |
| 02:04, 8 April 2011 | Ray blend red.png (file) |  |
227 KB | Inchoate | red blended out | 1 |
| 02:03, 8 April 2011 | Ray blend off.png (file) |  |
240 KB | Inchoate | ray blend off | 1 |
| 14:55, 31 March 2011 | Radius of gyration Example.png (file) |  |
117 KB | Speleo3 | 1 | |
| 08:12, 27 March 2011 | Axes demo.png (file) |  |
62 KB | Mretegan | Demo for a simple cartesian coordinate system. | 1 |
| 13:18, 19 March 2011 | Example.png (file) |  |
470 KB | Hongbo zhu | Demonstration of MSMS plugin for PyMOL (PDB: 1acb) | 1 |
| 13:54, 16 March 2011 | Slice example 2.png (file) |  |
169 KB | DBorhani | Slice example #2 | 1 |
| 13:53, 16 March 2011 | Slice example 2 screenshot.png (file) |  |
145 KB | DBorhani | Pymol screen shot of slice example #2 | 1 |
| 02:47, 5 March 2011 | Rnt.png (file) |  |
132 KB | Inchoate | Ray-normal transparency example | 1 |
| 23:33, 2 March 2011 | Highlight ss1.png (file) |  |
236 KB | Inchoate | example of common highlighted secondary structures | 1 |
| 15:11, 22 February 2011 | SidechaincentersExample.png (file) |  |
163 KB | Speleo3 | 1 | |
| 09:53, 18 February 2011 | SpectrumanyExample.png (file) |  |
213 KB | Speleo3 | Coloring with different green shades, created with: import spectrumany fetch 2xwu, async=0 remove chain A or solvent spectrumany count, cyan greencyan yellow green forest 0x002000 viewport 800,600 orient zoom buffer=4 bg white dss as cartoon png spectruma | 1 |
| 09:34, 18 February 2011 | AAindexExample.png (file) |  |
242 KB | Speleo3 | created with: import aaindex, spectrumany fetch 2xwu, async=0 remove chain B or solvent aaindex2b KYTJ820101 spectrumany b, white limon green forest viewport 800,600 orient zoom buffer=4 bg white set surface_solvent show surface png aaindex-KYTJ820101.png | 1 |
| 15:43, 15 February 2011 | Salam.jpg (file) |  |
147 KB | Inchoate | mol. micro. Volume 79, Feb, 2011 | 1 |
| 16:06, 8 February 2011 | Map set ex.png (file) |  |
229 KB | Inchoate | Example consensus volume of the aligned ligands. | 1 |
| 10:39, 1 February 2011 | Apbs ex.png (file) |  |
164 KB | Inchoate | Side-by-side map comparisons | 1 |
| 17:31, 24 January 2011 | AngewChemIntEd Comm Cover R Cighetti.jpg (file) |  |
2.16 MB | Cigo86 | Image realized by Roberto Cighetti with PyMOL (Version 1.2r1) and GIMP (Version 2.6.8) http://onlinelibrary.wiley.com/doi/10.1002/anie.201004655/abstract | 1 |
| 17:03, 24 January 2011 | R Cighetti AngewChemCover.gif (file) |  |
602 KB | Cigo86 | Communication Cover on Angewandte Chemie, 2011, 50, 622-626 Picture made by Roberto Cighetti with PyMOL (The PyMOL Molecular Graphics System, Version 1.2r1, Schrödinger, LLC) and GIMP (GNU Image Manipulation Program, version 2.6.8) from PDB ID: 3FXI (for | 1 |
| 12:15, 7 January 2011 | O5NT-C5NT-CA-dist-menu.png (file) |  |
14 KB | Tlinnet | DisplacementMap parses best suggestions back to pymol as new objects. Command used: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10 | 1 |
| 12:11, 7 January 2011 | O5NT-C5NT-CA-dist.png (file) |  |
328 KB | Tlinnet | DisplacementMap parses best suggestions back to pymol as new objects. Command used: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10 | 1 |
| 12:07, 7 January 2011 | O5NT-C5NT-CA-dist-gnuplot.png (file) |  |
70 KB | Tlinnet | DisplacementMap gnuplot of data-matrix. Command: DisplacementMap O5NT, C5NT, CA, 40.0, 15.0, 10 | 1 |
| 17:44, 5 January 2011 | ColorByDisplacement-All-2.png (file) |  |
152 KB | Tlinnet | ColorByDisplacementAll used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) | 1 |
| 17:43, 5 January 2011 | ColorByDisplacement-All-1.png (file) |  |
174 KB | Tlinnet | ColorByDisplacementAll used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) | 1 |
| 17:29, 5 January 2011 | ColorByDisplacement-CA-2.png (file) |  |
98 KB | Tlinnet | ColorByDisplacementCA used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) | 1 |
| 17:28, 5 January 2011 | ColorByDisplacement-CA-1.png (file) |  |
110 KB | Tlinnet | ColorByDisplacement used on 5'-nucleotidase (pdb:1HP1 and pdb:1HPU) | 1 |
| 16:30, 3 January 2011 | PLoS BiomolGraph 2010 InputFiles.tar.bz2 (file) | |
2.03 MB | Cmura | 1 | |
| 19:14, 26 December 2010 | O5NT-1HP1-A-C5NT-1HPU-C-CA-dist-map.png (file) |  |
11 KB | Tlinnet | DisplacementMap gnuplot of data-matrix | 2 |
| 19:07, 26 December 2010 | O5NT-1HP1-A-C5NT-1HPU-C-CA-dist.png (file) |  |
106 KB | Tlinnet | DisplacementMap pymol output | 1 |
| 12:51, 2 December 2010 | Anaglyph1.png (file) |  |
346 KB | Inchoate | 1 | |
| 04:54, 9 November 2010 | Ukazky-plugin.png (file) |  |
12 KB | Hci | 1 | |
| 04:53, 9 November 2010 | Ukazky.png (file) |  |
621 KB | Hci | 1 | |
| 04:52, 9 November 2010 | Ukazky-plugin.PNG (file) |  |
12 KB | Hci | 1 | |
| 04:35, 9 November 2010 | Caver plugin2.png (file) |  |
18 KB | Hci | 1 | |
| 04:35, 9 November 2010 | Caver plugin1.png (file) |  |
30 KB | Hci | 1 | |
| 23:27, 19 October 2010 | 1rmv fiber.png (file) |  |
427 KB | Inchoate | 1RMV fiber, showing BiologicalUnit at work. | 1 |
| 05:00, 8 October 2010 | Orthoon2.png (file) |  |
66 KB | Karo | set orthoscopic, on (PDB code: 3AEH) | 1 |
| 04:59, 8 October 2010 | Orthooff2.png (file) |  |
66 KB | Karo | set orthoscopic, off (PDB code: 3AEH) | 1 |
| 04:58, 8 October 2010 | Orthoon.png (file) |  |
49 KB | Karo | set orthoscopic, on (PDB code 3AEH) | 1 |
