Seq view

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Revision as of 16:14, 2 November 2007 by Inchoate (talk | contribs)
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Overview

The seq_view command turns the sequence viewer on and off. The sequence viewer is a very handy tool, you can use it for example to select residues very easily. When the sequence viewer is turned on, you can select individual residues or multiple residues by selecting residues, using the mouse, on the sequence viewer.

Note: The sequence viewer, seems to slow down PyMOL when very many proteins are loaded into PyMOL. Therefore, if you have many proteins loaded, turn off the sequence viewer to increase performance if you don't need the viewer.

Syntax

# to turn the sequence viewer on.
set seq_view, 1

# to turn the sequence viewer off.
set seq_view, 0

Related settings

seq_view_color

seq_view_discrete_by_state

seq_view_fill_char

seq_view_fill_color

seq_view_format

seq_view_label_color

seq_view_label_mode

seq_view_label_spacing

seq_view_label_start

seq_view_location

seq_view_overlay

seq_view_unaligned_color

seq_view_unaligned_mode