CavitOmiX

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Revision as of 07:04, 23 December 2022 by Steinkeg (talk | contribs)
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Type PyMOL Plugin
Download https://innophore.com/cavitomix
Author(s) Georg Steinkellner, Christian C. Gruber, Karl Gruber*, and the Innophore Team
License
https://innophore.com
Cavitomix.png

CavitOmiX 1.0

CavitOmiX.

  • Predict protein structures within seconds for any protein sequence using [OpenFold by NVIDIA BioNeMo] (coming soon!) and [ESMFold by Meta]
  • [AlphaFold2] models can be retrieved via UniProt ID
  • Cavities can be calculated for molecules loaded in PyMOL
  • Analyze the hydrophobicity of your cavities
  • Protein structures can be retrieved from the [PDB] using the PDB code
  • Mix and match all the above in a single entry, align the structures and get an quick overview
  • Cavity calculation setting scan be changed
  • Each Cavity is an "residue" entry, each cavity point is an "atom", so you can select, remove, copy, represet cavities to your liking!


Overview


File:.png
CavitOmiX PyMOL plugin empowered by NVIDIA BioNeMo

References

  1. Innophore GmbH
  2. [NVIDIA BioNeMo]