News & Updates
New Script
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save_settings can dump all changed settings to a file
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Tips & Tricks
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Instructions for generating 3D PDFs using PyMOL.
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Wiki Update
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Wiki has been updated. Please report any problems to the sysops.
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New Scripts
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Create objects for each molecule or chain in selection with split_object and split_chains
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New Script
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Rotkit: is a collection of usefull scripts to place your dye/molecule where you want. It includes a very handy, rotation around line, function.
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New Script
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Forster-distance-calculator: Can be used as a pymol-python shortcut to calculate the Förster distance between dyes from different companies. Useful, if the user have pymol installed, but not python. This script is meant as a tool to finding the right dyes, when labelling suitable positions for the site-directed cysteine mutants. See DisplacementMap.
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New Script
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propka: Fetches the pka values for your protein from the propka server. propka generates a pymol command file that make pka atoms, color and label them according to your protein. Inspection is made easy by grouping the pka atoms in the pymol menu.
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Older News
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See Older_News.
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Did you know...
sst is a wrapper for the SST secondary structural assignment web service. The command updates PyMOL's ss atom property.
SST does minimum message length inference of secondary structure based on C-alpha atom positions.
Usage
sst [ selection [, raw [, state ]]]
Arguments
- selection = str: atom selection {default: all}
- ..→
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A Random PyMOL-generated Cover. See Covers.
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