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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) GoogleSearch
News & Updates
Warren News about Warren DeLano's passing may be read on Warren's memorial page.
PyMOLWiki Reformatted Main Page. Some delays might occur from resizing images, but that should go away once the images are cached.
PyMOLWiki New — Search the PyMOLWiki via GoogleSearch
PyMOL PyMOL is known to work under Mac OS X 10+ (Snow Leopard) using the new Fink and incentive builds. See Installing PyMOL under Fink.
PyMOL PyMOL now has a Set command for basic settings, and a Set_bond command for bond-only settings.
PyMOL Space— new command to control PyMOL's usage of color spaces.
Did you know...

Window

window controls the visibility of PyMOL's output window

Some actions (maximize, focus, defocus) are not consistent across operating systems.

Non-functional in PyMOL 2.0, will be available again in 2.1

Usage

window [ action [, ... ]]

Actions

Hide the window (Warning: might make the window inaccessible. Intended for programmed automation):

window hide

Show the ..→

A Random PyMOL-generated Cover. See Covers.
Random PyMOL-generated Journal Cover