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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
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Script Library Plugins FAQ
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News & Updates
Warren News about Warren DeLano's passing may be read on Warren's memorial page.
PyMOLWiki Reformatted Main Page. Some delays might occur from resizing images, but that should go away once the images are cached.
PyMOLWiki New — Search the PyMOLWiki via GoogleSearch
PyMOL PyMOL is known to work under Mac OS X 10+ (Snow Leopard) using the new Fink and incentive builds. See Installing PyMOL under Fink.
PyMOL PyMOL now has a Set command for basic settings, and a Set_bond command for bond-only settings.
PyMOL Space— new command to control PyMOL's usage of color spaces.
Did you know...

SelInside

selInside selects all atoms of a certain type that are located within the bounding box defined by some selection. See examples.

Usage

<source lang="python">

  1. find all atoms inside the box spanned by (0,0,0) and (10,10,10)
  2. for the example PDB, 1hpv

fetch 1hpv pseudoatom b1, ..→

A Random PyMOL-generated Cover. See Covers.
Random PyMOL-generated Journal Cover