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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) GoogleSearch


News & Updates
Warren News about Warren DeLano's passing may be read on Warren's memorial page.
PyMOLWiki Reformatted Main Page. Some delays might occur from resizing images, but that should go away once the images are cached.
PyMOLWiki New — Search the PyMOLWiki via GoogleSearch
PyMOL PyMOL is known to work under Mac OS X 10+ (Snow Leopard) using the new Fink and incentive builds. See Installing PyMOL under Fink.
PyMOL PyMOL now has a Set command for basic settings, and a Set_bond command for bond-only settings.
PyMOL Space— new command to control PyMOL's usage of color spaces.
Do you know this PyMOL command...

Get chains

This command will return a python list of chains for the given selection.

Proteins structures often have more than one chain of residues present in a structure file. This command will fetch the names of each chain present. Because of the lack of standards, sometimes chain A will also be blank ..→

A Random PyMOL-generated Cover. See Covers.
Random PyMOL-generated Journal Cover