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News & Updates PyMOL Open-Source Fellowship Schrödinger is now accepting applications for the PyMOL Open-Source Fellowship program! Details on http://pymol.org/fellowship Official Release PyMOL, AxPyMOL, and JyMOL v1.7.2 have all been released on August 4, 2014. Official Release PyMOL, AxPyMOL, and JyMOL v1.7 have all been released today, January 14, 2014. New Plugin Bondpack is a collection of PyMOL plugins for easy visualization of atomic bonds. New Plugin MOLE 2.0 is a new plugin for rapid analysis of biomacromolecular channels in PyMOL. 3D using Geforce PyMOL can now be visualized in 3D using Nvidia GeForce video cards (series 400+) with 120Hz monitors and Nvidia 3D Vision, this was previously only possible with Quadro video cards. New Plugin GROMACS_Plugin is a new plugin that ties together PyMOL and GROMACS. New Software CMPyMOL is a software that interactively visualizes 2D contact maps of proteins in PyMOL. New Script cgo_arrow draws an arrow between two picked atoms. Tips & Tricks Instructions for generating movie PDFs using .mpg movies from PyMOL. Older News See Older News.

Did you know... Transformations Type Python Script Download transformations.py Author(s) Christoph Gohlke License BSD This code has been put under version control in the project Pymol-script-repo Introduction This script provides a library of functions for manipulation of matrices and vectors, useful in comparing alignments of various objects. It was written by Christoph Gohlke and is available along with many other scripts from his website. Usage The script must be imported in any other script that uses it. The easiest way to do this is to use the Pymol-script-repo. import transformations See also The following scripts use transformations.py: elbow_angle

A Random PyMOL-generated Cover. See Covers.