Grepset: Difference between revisions

From PyMOLWiki
Jump to navigation Jump to search
No edit summary
(psico)
 
(10 intermediate revisions by 5 users not shown)
Line 1: Line 1:
{{Infobox script-repo
|type      = script
|filename  = grepset.py
|author    = [[User:Zac|Ezequiel Panepucci]]
|license  = BSD
}}
{{Infobox psico
|module    = psico.helping
}}
Use this little script to explore PyMOL's myriad settings.
Use this little script to explore PyMOL's myriad settings.


Line 6: Line 17:


# put the script in a file called '''grepset.py'''
# put the script in a file called '''grepset.py'''
# from within PyMOL execute '''run grepset.py'''
# from within PyMOL execute '''run grepset.py'''. If you have the Pymol-script library configured, then '''import grepset'''
# try it out, see examples below.
# try it out, see examples below.


Line 42: Line 53:
</pre>
</pre>


== The Script itself: grepset.py ==
[[Category:Script_Library|Grepset]]
<source lang="python">
[[Category:UI_Scripts]]
from pymol import cmd
[[Category:Pymol-script-repo]]
import pymol.setting
 
def grepset(regexp=''):
  '''
DESCRIPTION
  "grepset" greps through the list of settings using a python
  regular expression as defined in the 're' module.
  It returns a list of settings/values matching the regexp.
  No regexp returns every setting.
 
USAGE
  grepset [regexp]
 
EXAMPLE
  grepset line
  grepset ray
 
SEE ALSO
  Python re module
  '''
 
  from re import compile
 
  count=0
  regexp=compile(regexp)
  for a in pymol.setting.get_index_list():
      setting=pymol.setting._get_name(a)
      if regexp.search(setting):
        count = count + 1
        print '%-30s %s' % (setting, cmd.get_setting_text(a,'',-1))
 
  print '%d settings matched' % count
cmd.extend('grepset',grepset)
 
</source>

Latest revision as of 10:04, 2 March 2017

Type Python Script
Download grepset.py
Author(s) Ezequiel Panepucci
License BSD
This code has been put under version control in the project Pymol-script-repo

Included in psico
This command or function is available from psico, which is a PyMOL extension.

Module psico.helping

Use this little script to explore PyMOL's myriad settings.

Usefull for newbies and those with not so good memory skills...

To use:

  1. put the script in a file called grepset.py
  2. from within PyMOL execute run grepset.py. If you have the Pymol-script library configured, then import grepset
  3. try it out, see examples below.

Example 1: grepset light 

cartoon_highlight_color        default
dot_lighting                   on
light                          [ -0.40000, -0.40000, -1.00000 ]
mesh_lighting                  off
two_sided_lighting             off
5 settings matched

Example 2: grepset trans 

cartoon_transparency           0.00000
ray_transparency_contrast      1.00000
ray_transparency_shadows       1
ray_transparency_spec_cut      0.90000
ray_transparency_specular      0.40000
sphere_transparency            0.00000
stick_transparency             0.00000
transparency                   0.00000
transparency_mode              2
transparency_picking_mode      2
10 settings matched

Example 3: grepset ^trans 

transparency                   0.00000
transparency_mode              2
transparency_picking_mode      2
3 settings matched
Retrieved from "https://pymolwiki.org/index.php?title=Grepset&oldid=12538"