Talk:Normalize ccp4 maps

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Discussions about isolevel discrepancy between PyMOL and Coot

PyMOL normalizes across the data grid in the ccp4 file, not across the unit cell. Better options might be:

  • normalize across the unit cell
  • not to normalize at all (change the default of normalize_ccp4_maps to off)
  • normalize based on AMEAN and ARMS reported in the ccp4 map header