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• 07:30, 11 April 2025 PedroLacerda talk contribs created page Declare Command (Created page with "==The problem Curent PyMOL approach to new plugin commands are outdated. ==The proposal Introduce a new system based on modern Python with type checking and implicit conversion. ==What works right now? On PyMOL open-source, but not on Incentive, there's a cmd.declare_command but isn't very much working for all possible cases. ==Examples <source lang="python"> @declare_command def new_command( dirname: Path = '.', nullable_point: Optional[Tuple[int, int,...")
• 06:57, 19 January 2025 PedroLacerda talk contribs created page File:Screenshot from 2025-01-19 07-52-39.png
• 06:57, 19 January 2025 PedroLacerda talk contribs uploaded File:Screenshot from 2025-01-19 07-52-39.png
• 06:56, 19 January 2025 PedroLacerda talk contribs created page File:Screenshot from 2025-01-19 07-53-05.png
• 06:56, 19 January 2025 PedroLacerda talk contribs uploaded File:Screenshot from 2025-01-19 07-53-05.png
• 06:56, 19 January 2025 PedroLacerda talk contribs created page File:Screenshot from 2025-01-19 07-55-07.png
• 06:56, 19 January 2025 PedroLacerda talk contribs uploaded File:Screenshot from 2025-01-19 07-55-07.png
• 17:27, 17 January 2025 PedroLacerda talk contribs created page File:Screenshot from 2025-01-17 18-26-54.png (Analyzing step.)
• 17:27, 17 January 2025 PedroLacerda talk contribs uploaded File:Screenshot from 2025-01-17 18-26-54.png (Analyzing step.)
• 17:07, 17 January 2025 PedroLacerda talk contribs created page File:Screenshot from 2025-01-17 18-06-58.png (The running step.)
• 17:07, 17 January 2025 PedroLacerda talk contribs uploaded File:Screenshot from 2025-01-17 18-06-58.png (The running step.)
• 17:02, 17 January 2025 PedroLacerda talk contribs created page Vina (Created page with "= Vina (vs.py) = This plugin enables small scale virtual screening with the AutoDock Vina software stack. It uses Meeko and Scrubber to prepare molecular ligands, and PLIP to analyze the results. It was tested on PyMOL 3.0 with Python 3.10. Currently supports only Linux and probably Mac. == Input == Multi-smi SMILES file (e.g. ''mols.smi''). Cc1c(Cl)cccc1Nc1ncccc1C(=O)OC[C@H](O)CO ZINC000000000171 CN(C)CC[C@@H]1c2ccc(Cl)cc2CCc2cccnc21 ZINC000000000179...")
• 16:23, 17 January 2025 PedroLacerda talk contribs created page File:Screenshot from 2025-01-17 17-21-36.png (Vina (vs.py) preparation step.)
• 16:23, 17 January 2025 PedroLacerda talk contribs uploaded File:Screenshot from 2025-01-17 17-21-36.png (Vina (vs.py) preparation step.)
• 01:52, 18 November 2019 PedroLacerda talk contribs uploaded a new version of File:Views.png
• 01:28, 18 November 2019 PedroLacerda talk contribs uploaded File:Views.png (Screenshot of the "views" plugin.)