Difference between revisions of "VisLoad"
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Revision as of 11:12, 16 March 2010
visLoad will load an object and show it in your desired representation. PyMOL by default loads things as lines (or spheres, a setting you may change), but not others.
Usage
- Save the code to "visLoad.py".
- Run the code from PyMOL or put it in your .pymolrc
- Use visLoad whenever you would use load
- To change representations, update "cartoon" to something else, or add more intermediate commands.
The Code
import string
import os
from os import path
def visLoad(filename, object=None, *args, **kwargs):
if object==None:
object = string.split(os.path.basename(filename),".")[0]
cmd.set("suspend_updates")
try:
cmd.load(filename, object, *args, **kwargs)
cmd.show_as("cartoon", object)
finally:
cmd.set("suspend_updates", "off")
cmd.extend("visLoad", visLoad)