User talk:Inchoate

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Jason, Conserning the Kabsch alogrithm.... Can you take two sets of vectors with different numbers in each set and have it loop over the larger set?

For instance, I have CA and CB positions for 4 residues (residues aren't sequential), could I find the optimal RMSD between the 4 residue CA_CB set and a another protein (well, it's own CA_CB set) ?

I haven't looked at the code, but I figured you are more familiar with it.

Thanks, Dan