Difference between revisions of "User:Gilleain"

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Currently doing a PhD in structural bioinformatics at Glasgow University. I used to work on the [http://www.tops.leeds.ac.uk TOPS] project.
 
Currently doing a PhD in structural bioinformatics at Glasgow University. I used to work on the [http://www.tops.leeds.ac.uk TOPS] project.
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Scripts by me:
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* [[Translate_And_Measure]] : Move and report distances.
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* [[Bounding_Box]] : CGO box around a selection.
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* [[Ellipsoid]] : Callback ellipsoids.
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* [[Plane_Wizard]] : Wizard of the planes.
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* [[ss]] : List secondary structures as "start-end type".
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* [[iterate_sses]] : Advanced version of [[ss]], allows user to pass a function to be applied to each sse.
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* [[motif]] : Easy display of backbone motifs like nests and catgrips (or, of course, helices or strands). Also lists phi/psi.

Latest revision as of 16:57, 9 October 2007

Been using PyMol on OSX for a while now, I do a lot of python programming now so it's great to write scripts for (dino is also nice, but has a more tcl-like syntax).

Currently doing a PhD in structural bioinformatics at Glasgow University. I used to work on the TOPS project.

Scripts by me:

  • Translate_And_Measure : Move and report distances.
  • Bounding_Box : CGO box around a selection.
  • Ellipsoid : Callback ellipsoids.
  • Plane_Wizard : Wizard of the planes.
  • ss : List secondary structures as "start-end type".
  • iterate_sses : Advanced version of ss, allows user to pass a function to be applied to each sse.
  • motif : Easy display of backbone motifs like nests and catgrips (or, of course, helices or strands). Also lists phi/psi.