Uploads by Speleo3
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This special page shows all uploaded files.
| Date | Name | Thumbnail | Size | Description | Versions |
|---|---|---|---|---|---|
| 04:25, 29 January 2021 | Properties-Inspector.png (file) |  |
162 KB | Screenshot of the properties inspector panel after applying the "pretty" preset to PDB 1rx1. | 1 |
| 08:37, 1 October 2020 | 6sps-mesh-ligand-carved.png (file) |  |
87 KB | 1 | |
| 08:36, 1 October 2020 | 6sps-mesh-ligand.png (file) |  |
137 KB | 1 | |
| 08:36, 1 October 2020 | 6sps-mesh-all.png (file) |  |
297 KB | 1 | |
| 08:35, 1 October 2020 | Isomesh-buffer-carve.png (file) |  |
25 KB | isomesh/isosurface buffer and carve arguments explained | 1 |
| 08:53, 22 September 2020 | Cartoon cylindrical helices-2.png (file) |  |
31 KB | 1bb1 with cartoon_cylindrical_helices mode 2 in PyMOL 2.5 | 1 |
| 08:53, 22 September 2020 | Cartoon cylindrical helices-1.png (file) |  |
33 KB | 1bb1 with cartoon_cylindrical_helices in PyMOL 2.5 | 1 |
| 01:29, 23 June 2020 | Flags-ignore-exfoliate.png (file) |  |
64 KB | Ala-Cys with "ignore" (left) and "exfoliate" (right) flags on the CYS atoms | 1 |
| 11:28, 20 December 2018 | Ray trace disco factor-1-spheres.png (file) |  |
31 KB | fragment indane as spheres set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0 | 1 |
| 11:28, 20 December 2018 | Ray trace disco factor-0-spheres.png (file) |  |
35 KB | fragment indane as spheres set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0 | 1 |
| 11:27, 20 December 2018 | Ray trace disco factor-1-sticks.png (file) |  |
20 KB | fragment indane as sticks set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0 | 1 |
| 11:27, 20 December 2018 | Ray trace disco factor-0-sticks.png (file) |  |
23 KB | fragment indane as sticks set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0 | 1 |
| 11:25, 20 December 2018 | Ray trace disco factor-1-cartoon.png (file) |  |
42 KB | fetch 1ubq, async=0 as cartoon set ray_trace_mode, 3 set ray_trace_disco_factor, 1.0 | 1 |
| 11:19, 20 December 2018 | Ray trace disco factor-0-cartoon.png (file) |  |
43 KB | fetch 1ubq, async=0 as cartoon set ray_trace_mode, 3 set ray_trace_disco_factor, 0.0 | 1 |
| 13:12, 13 November 2018 | Designer-demo-plugin.png (file) |  |
146 KB | Screenshot of Qt Designer with the demo plugin UI | 1 |
| 07:23, 13 November 2018 | Plugin manager installed.png (file) |  |
50 KB | fix typo | 1 |
| 07:20, 13 November 2018 | Plugin manager settings.png (file) |  |
38 KB | 1 | |
| 07:20, 13 November 2018 | Plugin manager install new.png (file) |  |
63 KB | 1 | |
| 06:51, 22 October 2018 | Load brick example.png (file) |  |
45 KB | volume display of an artificial map | 1 |
| 05:53, 24 July 2018 | Ramp-levels-menu.png (file) |  |
88 KB | changing ramp level after APBS calculation | 1 |
| 05:46, 24 July 2018 | APBS-Electrostatics-Plugin-Options.png (file) |  |
57 KB | Screenshot of the "APBS Electrostatics" plugin with all options extended. | 1 |
| 03:42, 13 December 2017 | Cartoon all alt.png (file) |  |
159 KB | fetch 5a0d, async=0 spectrum alt as cartoon set cartoon_all_alt | 1 |
| 05:11, 29 November 2017 | Right-click-macro.png (file) |  |
31 KB | Atom right click context menu with selection macro title | 1 |
| 16:01, 21 November 2017 | Solvent-or-chain-A.png (file) |  |
337 KB | fetch 1a00, async=0 color green, polymer orient as ribbon bg white set ray_shadow, 0 show spheres, solvent or chain A | 1 |
| 16:01, 21 November 2017 | Solvent-and-chain-A.png (file) |  |
231 KB | fetch 1a00, async=0 color green, polymer orient as ribbon bg white set ray_shadow, 0 show spheres, solvent and chain A | 1 |
| 04:50, 19 October 2017 | Intra xfit-1nmr.png (file) |  |
174 KB | fetch 1nmr, async=0 intra_xfit 1nmr, load_b=1 spectrum b, blue_white_red, guide set all_states | 1 |
| 07:48, 22 August 2017 | PluginManagerCaverPlugin301.jpg (file) |  |
106 KB | Plugin Manager Screenshot with modified Caver Plugin | 1 |
| 16:19, 24 February 2017 | Surface carve selection.gif (file) |  |
343 KB | 1 | |
| 15:07, 24 February 2017 | Surface proximity.png (file) |  |
124 KB | fetch 5hpr, async=0 color red color yellow, chain B as cartoon show surface, chain B copy off, 5hpr set surface_proximity, off, off label A/21/CA, "surface_proximity=on" label /off//A/21/CA, "surface_proximity=off" set grid_mode set_view (\ -0.6789... | 1 |
| 11:43, 5 October 2016 | C-menu-isomesh-negative.png (file) |  |
28 KB | "C > negative > ..." menu of an isomesh in PyMOL 1.8.4 | 1 |
| 11:43, 5 October 2016 | A-menu-isomesh-negative.png (file) |  |
25 KB | "A > mesh" menu of a map in PyMOL 1.8.4 | 1 |
| 11:07, 5 October 2016 | Stick h scale.png (file) |  |
29 KB | fragment trp as sticks set stick_h_scale, 0.4 | 1 |
| 14:13, 5 May 2016 | Hdgyp cover.jpg (file) |  |
553 KB | downsampled | 2 |
| 08:48, 28 April 2016 | Bnitools.png (file) |  |
14 KB | Screenshot of the BNI Tools plugin menu | 1 |
| 12:37, 12 April 2016 | Cartoon gap cutoff.png (file) |  |
42 KB | 1 | |
| 14:39, 10 September 2015 | 1okyVolPanel.png (file) |  |
5 KB | Volume panel for File:1okyVol.png | 1 |
| 14:35, 10 September 2015 | 1okyVol.png (file) |  |
329 KB | Volume visualization of electron density for PDB 1oky | 1 |
| 21:50, 8 March 2014 | Surface ramp above mode.jpg (file) |  |
163 KB | illustration of the surface_ramp_above_mode/surface_solvent setting combinations | 1 |
| 03:53, 23 April 2013 | Cgo arrow example.png (file) |  |
34 KB | CGO arrow, made with cgo_arrow script | 1 |
| 03:47, 6 December 2012 | Connect cutoff.png (file) |  |
32 KB | connect_cutoff setting example | 1 |
| 08:16, 26 June 2012 | Poseviewscreenshot.png (file) |  |
54 KB | screenshot for poseview example: fetch 1a00, async=0 poseview chain C and resn HEM | 1 |
| 05:10, 14 December 2011 | 1C0M tmalign01.png (file) |  |
145 KB | /1C0M//B to 1BCO alignment | 1 |
| 05:09, 14 December 2011 | 1C0M cealign01.png (file) |  |
146 KB | 1 | |
| 05:09, 14 December 2011 | 1C0M super01.png (file) |  |
152 KB | /1C0M//B to 1BCO alignment | 1 |
| 05:09, 14 December 2011 | 1C0M align01.png (file) |  |
151 KB | /1C0M//B to 1BCO alignment | 1 |
| 13:55, 31 March 2011 | Radius of gyration Example.png (file) |  |
117 KB | 1 | |
| 14:11, 22 February 2011 | SidechaincentersExample.png (file) |  |
163 KB | 1 | |
| 08:53, 18 February 2011 | SpectrumanyExample.png (file) |  |
213 KB | Coloring with different green shades, created with: import spectrumany fetch 2xwu, async=0 remove chain A or solvent spectrumany count, cyan greencyan yellow green forest 0x002000 viewport 800,600 orient zoom buffer=4 bg white dss as cartoon png spectruma | 1 |
| 08:34, 18 February 2011 | AAindexExample.png (file) |  |
242 KB | created with: import aaindex, spectrumany fetch 2xwu, async=0 remove chain B or solvent aaindex2b KYTJ820101 spectrumany b, white limon green forest viewport 800,600 orient zoom buffer=4 bg white set surface_solvent show surface png aaindex-KYTJ820101.png | 1 |
| 10:47, 29 September 2010 | PyMOLreferenceCard.zip (file) |  |
112 KB | fix some commas fix 'near' and 'within' fix cartoon commands | 2 |
