Difference between revisions of "PICv"

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Protein interaction clustering and visualization (PICv) is a pioneering attempt at clustering and understanding protein-protein interaction for any given protein by implementing ML based clustering. The PyMOL plugin facilitates importing of the best PDB structure for a given protein and 3D-visualization of protein-protein interaction interface clusters.
 
Protein interaction clustering and visualization (PICv) is a pioneering attempt at clustering and understanding protein-protein interaction for any given protein by implementing ML based clustering. The PyMOL plugin facilitates importing of the best PDB structure for a given protein and 3D-visualization of protein-protein interaction interface clusters.
 
+
[[File:PICv.png]]
  
 
== '''Installation''' ==
 
== '''Installation''' ==
 
Download the plugin from the following URL:
 
Download the plugin from the following URL:
  
[http://vidyaniranjan.co.in/PICv/PICv.py]
+
http://vidyaniranjan.co.in/PICv/PICv.py
 
 
  
 
== '''Installation and Demo video''' ==
 
== '''Installation and Demo video''' ==
 
  
 
Visit the below mentioned link for detailed installation followed by demo.
 
Visit the below mentioned link for detailed installation followed by demo.
  
 
https://youtu.be/3bxpASy-FV0
 
https://youtu.be/3bxpASy-FV0
 
  
 
== '''Developed by''' ==
 
== '''Developed by''' ==
 
  
 
The plugin was developed by Center of Excellence Computational Genomics, R V College of Engineering, Bangalore, India in collaboration with Protein Data Bank in Europe (PDBe), UK
 
The plugin was developed by Center of Excellence Computational Genomics, R V College of Engineering, Bangalore, India in collaboration with Protein Data Bank in Europe (PDBe), UK

Revision as of 03:39, 10 February 2021

About PICv

Protein interaction clustering and visualization (PICv) is a pioneering attempt at clustering and understanding protein-protein interaction for any given protein by implementing ML based clustering. The PyMOL plugin facilitates importing of the best PDB structure for a given protein and 3D-visualization of protein-protein interaction interface clusters. PICv.png

Installation

Download the plugin from the following URL:

http://vidyaniranjan.co.in/PICv/PICv.py

Installation and Demo video

Visit the below mentioned link for detailed installation followed by demo.

https://youtu.be/3bxpASy-FV0

Developed by

The plugin was developed by Center of Excellence Computational Genomics, R V College of Engineering, Bangalore, India in collaboration with Protein Data Bank in Europe (PDBe), UK

For more details visit

http://www.vidyaniranjan.co.in/