Difference between revisions of "Main Page"

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! Python 3
 
! Python 3
 
| New [[2to3|Python 3 compatibility guide]] for scripts and plugins
 
| New [[2to3|Python 3 compatibility guide]] for scripts and plugins
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! Official Release
 
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| [https://pymol.org PyMOL v2.3 has been released] on February 11, 2019.
 
 
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! POSF
 
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! New Plugin
 
! New Plugin
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| [[ProBiS_H2O|ProBiS H2O]] is a new plugin for identification of conserved waters in protein structures.
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| [[PICv|PICv]] is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
 
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! Selection keywords
 
! Selection keywords

Revision as of 05:05, 5 March 2021

hosted by SBGridlogo2.jpg
Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.4 has been released on May 20, 2020.
Python 3 New Python 3 compatibility guide for scripts and plugins
POSF New PyMOL fellows announced for 2018-2019
Tutorial Plugins Tutorial updated for PyQt5
New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

Color Objects

Type Python Script
Download
Author(s) Gareth Stockwell
License

<source lang="python">

  3. Colour by object

from pymol import cmd

def color_obj(rainbow=0): 

       """

AUTHOR 

       Gareth Stockwell

USAGE 

       color_obj(rainbow=0)

       This function colours each object currently in the PyMOL heirarchy
       with a different colour.  Colours used are either the 22 named
       colours used by PyMOL (in which case the 23rd object, if it exists,
       gets the same colour as the first), or are the colours of the rainbow

SEE ALSO 

       util.color_objs()
       """

       # Process arguments
       rainbow = int(rainbow)

       # Get names of all PyMOL objects
       obj_list = cmd.get_names('objects')

       if rainbow:

          print "\nColouring objects as rainbow\n"

          nobj = len(obj_list)

          # Create colours starting  ..→
A Random PyMOL-generated Cover. See Covers.


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