Load img stack
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| Type | Python Script |
|---|---|
| Download | load_img_stack.py |
| Author(s) | Thomas Holder |
| License | BSD-2-Clause |
| This code has been put under version control in the project Pymol-script-repo | |
This script adds the load_img_stack command, which loads a set of images as a map object. The images can either be individual files, or contained in a multi-page TIFF file.
Usage
load_img_stack pattern [, name [, grid [, channel [, normalize [, extent ]]]]]
Arguments
- pattern = str: image filename or pattern
- name = str: map object name to create
- grid = float: grid spacing in Angstrom {default: 1.0}
- channel = int: color channel for RGB images {default: 0}
- normalize = 0 or 1: normalize data {default: 1}
- extent = 3-float: (a,b,c) edge lengths in Angstrom, overwrites "grid" arguments if given {default: }
Example
load_img_stack img*.png, name=map, extent=(10.0, 10.0, 5.0) volume vol, map, rainbow