Difference between revisions of "Get Model"

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(NOTES)
Line 21: Line 21:
 
                             +str(at.index)+" "\
 
                             +str(at.index)+" "\
 
                             +at.b+" "\
 
                             +at.b+" "\
                             +str(at.coords[0])+" "\
+
                             +str(at.coord[0])+" "\
                             +str(at.coords[1])+" "\
+
                             +str(at.coord[1])+" "\
                             +str(at.coords[2])  
+
                             +str(at.coord[2])  
 
</source>
 
</source>
  
 
===SEE ALSO===
 
===SEE ALSO===
 
[[Category:Commands|get_model]]
 
[[Category:Commands|get_model]]

Revision as of 12:51, 1 April 2009

DESCRIPTION

get_model returns a model object.

PYMOL API

cmd.get_model(string "selection" )

USAGE

cmd.get_model("chain A")

NOTES

It can be useful to loop through all the atoms of a selection (rather than using the iterate command)

atoms = cmd.get_model("chain A")
for at in atoms.atom:
    print "ATOM DEFINITION: "+at.chain+" "\
                             +at.resn+" "\
                             +str(at.resi)+" "\
                             +at.name+" "\
                             +str(at.index)+" "\
                             +at.b+" "\
                             +str(at.coord[0])+" "\
                             +str(at.coord[1])+" "\
                             +str(at.coord[2])

SEE ALSO