Main Page

Welcome to the PyMOL Wiki

We are the community-based support site for the popular molecular visualization program, PyMOL.

New Users New users are encouraged to join. Feel free to add any appropriate content; make an account and get started! Quick Links Table of Contents Index of all pages PyMOL Cheat Sheet: PDF Wiki Page Tutorials Commands Settings: All Documented Script Library Plugins See All Categories Frequently Asked Questions How to get involved! About PyMOL

News and Updates (archive)

Wiki ♦ PyMOL Cheat Sheet (reference card) has been donated. It's also posted in the table above for quick access. ♦ Google Summer of Code 2008 for PyMOL has been created. Update: PyMOL wasn't chosen, so this page is now about ideas for improving PyMOL. ♦ Added a special category/section for active PyMOL Tutorials. These are pages not just with information, but easy to understand, step-by-step pages from which to learn. ♦ Updated the wiki. Also installed the newer GeSHI extension. Please keep an eye out for source code that is improperly tagged and so improperly formatted. See GeSHI Parameters. ♦ Adding a special category/section for active PyMOL Development. Screenshot of the donated PyMOL reference card.

PyMOL ♦ group command has been added. ♦ The truly awesome grid_mode setting has been added. ♦ Ellipsoids representation added for drawing thermal ellipsoids. ♦ PyMOL 1.0 has been released! ♦ PyMOL Official Documentation is also available for subscribers. Screenshot of Grid Mode in action.

Scripts & Plugins ♦ ImmersiveViz -- Headtracking user interface for PyMOL (watch the video)! ♦ Colorama --a PyMOL plugin which allows to color objects using adjustable scale bars ♦ ProMOL plugin added. Catalytic site prediction, other tools. Redirects to website. ♦ EMovie plugin added. Easy movies in PyMol using a GUI. ♦ DYNMAP plugin page created. Check it out! ♦ EZ-Viz Screenshot of Colorama.