Main Page

From PyMOLWiki
Revision as of 21:16, 26 February 2021 by AkshayUttarkar (talk | contribs)
Jump to navigation Jump to search
hosted by SBGridlogo2.jpg
Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.4 has been released on May 20, 2020.
Python 3 New Python 3 compatibility guide for scripts and plugins
Official Release PyMOL v2.3 has been released on February 11, 2019.
POSF New PyMOL fellows announced for 2018-2019
Tutorial Plugins Tutorial updated for PyQt5
New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

XML-RPC server

This page describes a custom user implementation of an XML-RPC server.

For PyMOL's built-in server, see RPC.

This server will enable any method in the 'cmd' module to be called remotely, as well as custom methods of the "pymol_interface" class (several examples of which are shown below). Other modules (such as util) could be wrapped using the same trick.

<source lang="python">

from pymol import cmd, util from threading import Thread from SimpleXMLRPCServer import SimpleXMLRPCServer import cPickle import os import re import string

def pymol_startup () :

 print "Loading PyMOL XML-RPC extensions"
 server = pymol_interface()

class pymol_xmlrpc_server (SimpleXMLRPCServer) :

 def __init__ (self, addr, interface) :
   self.interface = interface
   SimpleXMLRPCServer.__init__(self, addr, logRequests=0)
 def _dispatch (self, method, params) :
   if not self.interface.enable_xmlrpc :
     return -1
   result = -1
   func = None
   if  ..→
A Random PyMOL-generated Cover. See Covers.