Get fastastr

From PyMOLWiki
Revision as of 12:47, 30 July 2020 by Speleo3 (talk | contribs) (per chain)
Jump to navigation Jump to search

get_fastastr is an API-only function which returns the one-letter amino acid sequence in FASTA format.

Changed in PyMOL 2.2: Sequences per chain

PyMOL API

cmd.get_fastastr(string selection='all', int state=-1, int quiet=1)

Example

fetch 1ubq, async=0
print(cmd.get_fastastr('all'))

>1ubq
MQIFVKTLTGKTITLEVEPSDTIENVKAKIQDKEGIPPDQQRLIFAGKQLEDGRTLSDYNIQKESTLHLV
LRLRGG

See Also

Retrieved from "https://pymolwiki.org/index.php?title=Get_fastastr&oldid=13316"