Introduction
This script can be handsome, if one is working with Förster resonance energy transfer in proteins. The script calculates the Förster distance: R0, from two dyes excitation/emission spectres.
This script is very handsome, if one want's to pick two dyes from different companies, and the Förster distance is not provided in a table.
This script does no calculation of proteins in pymol, but is made as a "hack/shortcut" for a python script.
We use the python part of pymol to do the calculations, so a student would not need to install python at home, but simply pymol.
Spectre input
There should be provided the path to four datafiles:
Excitation and Emission spectre for the Donor dye: D_Exi="path.txt" D_Emi="path.txt
Excitation and Emission spectre ..→
