Nucleic Acid Sequence

Building a Nucleic Acid Sequence

At this time there is no known method by which to build nucleic acid sequences in PyMol. That being said, you can however use third party software to get the job done.

Check out these programs:

3DNA
B (aka "Biomer")
NAMOT
Enter sequence into web interface and get a pdb file back: http://structure.usc.edu/make-na/
Select A-DNA,B-DNA, then enter sequence into web interface and get a pdb file back: http://w3dna.rutgers.edu/rebuild/fiberch
Enter sequence into web interface and get a pdb file back: http://haddock.science.uu.nl/services/3DDART/