Movit
Hi everyone !
I wanted to see roughly if one protein could dock on another one, and could not find any mouse setting allowing to do that. Here is a script that does just that. Key bindings are:
q : translation +x a : translation -x w : translation +y s : translation -y w : translation +z s : translation -z r : rotation along x f : rotation along x (the other way) t : rotation along x g : rotation along x (the other way) y : rotation along x h : rotation along x (the other way)
Use : run movit.py during startup. Then, 'movit selection'.
It is not very practical, does anybody know how to do that with the mouse instead of just one step at a time like here ?
<pymol> from pymol import cmd
def movit(selection="all"):
"""USAGE : movit <selection> The selection can now be translated/rotated with the following keyboard shortcuts:
q,a : x translation w,s : y translation e,d : z translation
r,f : x rotation t,g : y rotation y,h : z rotation """
line="translate [1,0,0],"+selection cmd.alias ('q',line) line="translate [0,1,0],"+selection cmd.alias ('w',line) line="translate [0,0,1],"+selection cmd.alias ('e',line)
line="translate [-1,0,0],"+selection cmd.alias ('a',line) line="translate [0,-1,0],"+selection cmd.alias ('s',line) line="translate [0,0,-1],"+selection cmd.alias ('d',line)
line="rotate x,5,"+selection cmd.alias ('r',line) line="rotate y,5,"+selection cmd.alias ('t',line) line="rotate z,5,"+selection cmd.alias ('y',line)
line="rotate x,-5,"+selection cmd.alias ('f',line) line="rotate y,-5,"+selection cmd.alias ('g',line) line="rotate z,-5,"+selection cmd.alias ('h',line)
cmd.extend ("movit",movit)
</pymol>