New Scripts
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ResDe is a suite of programs designed to assist crystallographers in defining user defined hydrogen bond distance restraints, which can be helpful when refining low-resolution structures.
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New Script
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See BiologicalUnit, for a workaround to the buggy Symexp command or if you just want to learn more about symmetry expansion in PyMOL.
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New Script
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See Supercell, the new script for making XxYxZ supercells.
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New Script
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See Split_Object_Along_Axis, for a script that allows one to select a bond, and then generate 2 selections: one for the selection of all atoms that are on one side of this bond, and the other selection for the atoms on the other side of the bond.
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New Script
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See Consistent_View/_Map_Inspect, which is a toolkit for rapidly inspecting multiple maps and models.
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Server updates
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The underlying servers upon which the PyMOLWiki runs were upgraded over the weekend. We are now fully functional. A deep thanks to BitGnome for donating time and hardware for the PyMOL project.
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fetch_host setting
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Fetch_Host has been added to allow users to download PDBs from their PDB server (pdb, pdb euro, or pdb japan) of choice.
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Fetch
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Fetch has been updated to also load electron density maps.
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Schrodinger Buys PyMOL
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Schrodinger has purchased PyMOL. Development, support and open-source fun to continue! Read about the sale.
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User Movie
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One of our users has posted another interesting movie, images from which were created with PyMOL.
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New setting
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surface_cavity_mode to change how PyMOL displays cavities.
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Search fixed.
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Thanks to a eagle-eyed user, our search has been fixed. Please let us know if you have any search-related problems.
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New Command
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Cache—stores information on structures, so we don't have to recompute them.
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Warren
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News about Warren DeLano's passing may be read on Warren's memorial page.
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Setting
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Fetch_Path—Sets the default path for the fetch command.
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New Script
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SelInside—Creates a custom selection of all atoms spatially inside some user-defined box.
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