User contributions for Speleo3
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31 August 2011
- 07:1107:11, 31 August 2011 diff hist +117 Main Page new scripts: split_object and split_chains
- 07:0607:06, 31 August 2011 diff hist +110 Split object see also split_chains current
- 06:4306:43, 31 August 2011 diff hist +1,162 N Split chains Created page with "'''split_chains''' is a script that creates for each chain in selection its own object. == Usage == split_chains [ selection [, prefix ]] == Example == <source lang="python"..."
- 03:5803:58, 31 August 2011 diff hist +21 GetNamesInSel get_object_list current
- 03:4103:41, 31 August 2011 diff hist +23 N Get names redirect to capitalized name current
30 August 2011
- 11:2111:21, 30 August 2011 diff hist +500 SelectClipped select_clipped command current
- 09:0709:07, 30 August 2011 diff hist +120 Full screen "F" button current
- 09:0109:01, 30 August 2011 diff hist +314 Full screen Undo revision 6828 by Vinnyrose (talk)
29 August 2011
- 11:5111:51, 29 August 2011 diff hist +246 Selection Algebra pepseq
18 August 2011
- 11:5211:52, 18 August 2011 diff hist +498 PythonTerminal redundant script, functionality already in PyMOL current
- 11:3611:36, 18 August 2011 diff hist +38 m Get unused name No edit summary current
- 11:3311:33, 18 August 2011 diff hist +385 N Get legal name Created page with "'''get_legal_name''' is an API only function that clears any non-valid characters from a potential object name. ''New in PyMOL version 1.2'' == PyMOL API == <source lang="pyth..."
- 11:2611:26, 18 August 2011 diff hist +485 N Get unused name Created page with "'''get_unused_name''' is an API only function that returns a new object name. ''New in PyMOL version 1.2'' == PyMOL API == <source lang="python"> cmd.get_unused_name(string pr..."
- 11:0511:05, 18 August 2011 diff hist +964 N Get raw alignment Created page with "'''get_raw_alignment''' is an API only function that returns a list of lists of (object,index) tuples containing the raw per-atom alignment relationships. Alignment objects can b..."
15 August 2011
- 05:1005:10, 15 August 2011 diff hist −1,453 Center of mass catch get_unused_name error for backwards compatibility; Remove redundant previous implementation
- 04:5204:52, 15 August 2011 diff hist +25 Centroid use chempy instead of numpy
5 August 2011
- 03:2703:27, 5 August 2011 diff hist +121 Supercell headers, withmates=1 as default, tab-completion, see also
4 August 2011
- 08:1908:19, 4 August 2011 diff hist 0 Set Key make example working
- 03:4703:47, 4 August 2011 diff hist +50 Peptide Sequence mention fab and Builder current
3 August 2011
- 12:5812:58, 3 August 2011 diff hist +1,655 N Fab Created page with "'''fab''' builds peptide entities from sequence. The sequence must be specified in one-letter code. Several fragments will be created if the sequence contains spaces (chain break..." current
- 04:0604:06, 3 August 2011 diff hist +252 Align return value of cmd.align
2 August 2011
- 09:3509:35, 2 August 2011 diff hist +178 N Talk:Alter Created page with "The "Coloring a Viral Capsid by Distance from Core" example is very nice, but it has nothing to do with the "alter" command. --~~~~"
31 July 2011
- 15:0615:06, 31 July 2011 diff hist −67 Modeling and Editing Structures links
25 July 2011
- 03:5903:59, 25 July 2011 diff hist +1,253 User:Speleo3 save_settings
20 July 2011
- 07:1507:15, 20 July 2011 diff hist +39 m User:Speleo3 Scripts written by me
5 July 2011
- 08:3408:34, 5 July 2011 diff hist +38 Aa codes LEU missing in aa3
- 07:3107:31, 5 July 2011 diff hist +137 Find pairs state-index current
- 07:0907:09, 5 July 2011 diff hist +297 Iterate State ARGUMENTS
1 July 2011
- 06:4906:49, 1 July 2011 diff hist +1,326 N Talk:Plugindirectory Examples
- 05:4905:49, 1 July 2011 diff hist +150 AAindex see also
- 04:3904:39, 1 July 2011 diff hist +42 PyDet link fix current
- 04:2504:25, 1 July 2011 diff hist +81 Main Page PluginDirectory
30 June 2011
- 14:2914:29, 30 June 2011 diff hist +597 Talk:ProMOL Make this work in a personal plugin directory current
- 11:4011:40, 30 June 2011 diff hist +20 PluginArchitecture PluginDirectory
- 11:3511:35, 30 June 2011 diff hist +2,219 N Plugindirectory Created page with "This page describes how to set up a personal plugin directory. It supports single python files as well as directories which contain a __init__.py file. 1) Create a directory '''..."
28 June 2011
- 13:2913:29, 28 June 2011 diff hist +392 Dss arguments current
24 June 2011
- 05:0305:03, 24 June 2011 diff hist −1,203 m User:Speleo3 moved polarpairs script to its own page
- 05:0105:01, 24 June 2011 diff hist +21 m Polarpairs plugins category
- 05:0005:00, 24 June 2011 diff hist +1,823 N Polarpairs Created page with "Find polar pairs with the cmd.find_pairs function and return them as a list of atom pairs. It finds (more or less) the same contacts like [[distance|cmd.distance(m..."
- 04:3404:34, 24 June 2011 diff hist +6 m Find pairs PyMOL API
- 04:3304:33, 24 June 2011 diff hist +1,023 N Find pairs Created page with "'''find_pairs''' is an API only function which returns a list of atom pairs. Atoms are represented as (model,index) tuples. Can be restricted to hydrogen-bonding-like contacts. ..."
14 June 2011
- 11:3411:34, 14 June 2011 diff hist +413 User:Speleo3 build pymol
- 11:1611:16, 14 June 2011 diff hist +30 User:Speleo3 →Scripts written by me
9 June 2011
- 12:0012:00, 9 June 2011 diff hist +24 m User:Speleo3 No edit summary
- 11:5111:51, 9 June 2011 diff hist +1,179 User:Speleo3 polarpairs script
- 03:3103:31, 9 June 2011 diff hist +426 CalcArea No edit summary current
8 June 2011
- 12:3012:30, 8 June 2011 diff hist +158 Talk:FocalBlur No edit summary
- 12:1012:10, 8 June 2011 diff hist +115 FocalBlur angles as Fermat's spiral instead of random
7 June 2011
- 09:3609:36, 7 June 2011 diff hist +49 Pml2py strip of comment
6 June 2011
- 11:1811:18, 6 June 2011 diff hist +60 Main Page new script: show bumps