PyMOLWiki:Community Portal: Difference between revisions

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== CP ==
== CP ==
Look here for ways to get involved in the PyMolWiki!
Look here for ways to get involved in the PyMolWiki!
Editors, you can upload images for your examples and supporting text!  Check out [[Special:Upload]].


== Helping ==
== Helping ==

Revision as of 02:19, 2 March 2005

CP

Look here for ways to get involved in the PyMolWiki!

Editors, you can upload images for your examples and supporting text! Check out Special:Upload.


Helping

  • Importing the email list content: We have (lots) of email to sift through, extract data from and import into the Wiki
  • If you feel you have the time to help import data into the PyMol wiki, please email Tree.

New! GeShi: Syntax Highlighting for Python & More

Update: I have added the option for numbered syntax highlighting and non-numbered.

 <source lang="python">Non line-numbered code here</source>
 <npython>line-numbered code here</npython>

Now with line numbers (or not)!

<npython>

# axes.py

from pymol.cgo import * from pymol import cmd from pymol.vfont import plain

  1. create the axes object, draw axes with cylinders coloured red, green,
  2. blue for X, Y and Z

obj = [

  CYLINDER, 0., 0., 0., 50., 0., 0., 0.2, 1.0, 1.0, 1.0, 1.0, 0.0, 0.,
  CYLINDER, 0., 0., 0., 0., 50., 0., 0.2, 1.0, 1.0, 1.0, 0., 1.0, 0.,
  CYLINDER, 0., 0., 0., 0., 0., 50., 0.2, 1.0, 1.0, 1.0, 0., 0.0, 1.0,
  ]
  1. add labels to axes object (requires pymol version 0.8 or greater, I
  2. believe

cyl_text(obj,plain,[-5.,-5.,-1],'Origin',0.20,axes=[[3,0,0],[0,3,0],[0,0,3]]) cyl_text(obj,plain,[50.,0.,0.],'X',0.20,axes=[[3,0,0],[0,3,0],[0,0,3]]) cyl_text(obj,plain,[0.,50.,0.],'Y',0.20,axes=[[3,0,0],[0,3,0],[0,0,3]]) cyl_text(obj,plain,[0.,0.,50.],'Z',0.20,axes=[[3,0,0],[0,3,0],[0,0,3]])

  1. then we load it into PyMOL

cmd.load_cgo(obj,'axes') </npython>


See The Geshi Home Page

Tree