Intra rms cur: Difference between revisions

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===DESCRIPTION===
===DESCRIPTION===
"intra_rms_cur" calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting.  The rms values are returned as a python array.
'''intra_rms_cur''' calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting.  The rms values are returned as a python array.
   
   
===PYMOL API===
===PYMOL API===
<source lang="python">
<source lang="python">
cmd.intra_rms_cur( string selection, int state)
cmd.intra_rms_cur( string selection, int state)
</source>
</source>


===PYTHON EXAMPLE===
===PYTHON EXAMPLE===
<source lang="python">
<source lang="python">
  from pymol import cmd
from pymol import cmd
  rms = cmd.intra_rms_cur("(name ca)",1)
rms = cmd.intra_rms_cur("(name ca)",1)
</source>
</source>


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===SEE ALSO===
===SEE ALSO===
[[Fit]], [[Rms]], [[Rms_Cur]], [[Intra_Fit]], [[Intra_Rms]], [[Pair_Fit]]  
[[Fit]], [[Rms]], [[Rms_Cur]], [[Intra_Fit]], [[Intra_Rms]], [[Pair_Fit]]  


[[Category:Commands|intra_rms_cur]]
[[Category:Commands|intra_rms_cur]]

Revision as of 12:13, 29 June 2005

DESCRIPTION

intra_rms_cur calculates rms values for all states of an object over an atom selection relative to the indicated state without performing any fitting. The rms values are returned as a python array.

PYMOL API

cmd.intra_rms_cur( string selection, int state)

PYTHON EXAMPLE

from pymol import cmd
rms = cmd.intra_rms_cur("(name ca)",1)

USER EXAMPLES/COMMENTS

See Intra_Rms for selection caveats for this group of commands.

SEE ALSO

Fit, Rms, Rms_Cur, Intra_Fit, Intra_Rms, Pair_Fit