MSMS: Difference between revisions
Jump to navigation
Jump to search
Hongbo zhu (talk | contribs) No edit summary |
|||
| Line 1: | Line 1: | ||
{{Infobox script-repo | |||
|type = plugin | |||
|filename = plugins/msms.py | |||
|author = [[User:Hongbo_zhu|Hongbo Zhu]] | |||
|license = - | |||
}} | |||
= Introduction = | |||
[http://mgltools.scripps.edu/packages/MSMS/ MSMS] is an excellent tool for computing protein solvent excluded surface (SES). MSMS Plugin for PyMOL provides a graphical user interface for running MSMS and displaying its results in PyMOL. Most recent MSMS Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/msms.py this link]. | |||
Only works in Linux, since '''pdb_to_xyzrn''' is a shell script. Windows users please contact author for a script replacing '''pdb_to_xyzrn'''. | |||
= External links = | |||
[[File:Example.png|400px|thumb|right|Demonstration of MSMS plugin.]] | |||
* Most recent code on github: [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/msms.py MSMS Plugin for PyMOL @ GitHub] | |||
* Original site (not updated anymore): [http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html MSMS Plugin for PyMOL] | |||
[[Category:Plugins]] | |||
[[Category:Pymol-script-repo]] | |||
Revision as of 03:56, 12 April 2012
| Type | PyMOL Plugin |
|---|---|
| Download | plugins/msms.py |
| Author(s) | Hongbo Zhu |
| License | - |
| This code has been put under version control in the project Pymol-script-repo | |
Introduction
MSMS is an excellent tool for computing protein solvent excluded surface (SES). MSMS Plugin for PyMOL provides a graphical user interface for running MSMS and displaying its results in PyMOL. Most recent MSMS Plugin code can be obtained from this link.
Only works in Linux, since pdb_to_xyzrn is a shell script. Windows users please contact author for a script replacing pdb_to_xyzrn.
External links
- Most recent code on github: MSMS Plugin for PyMOL @ GitHub
- Original site (not updated anymore): MSMS Plugin for PyMOL