Mset: Difference between revisions
Jump to navigation
Jump to search
No edit summary |
|||
Line 1: | Line 1: | ||
'''mset''' sets up a relationship between molecular states and movie frames. This makes it possible to control which states are shown in which frame. | '''mset''' sets up a relationship between molecular states and movie frames. This makes it possible to control which states are shown in which frame. | ||
Line 24: | Line 23: | ||
<source lang="python"> | <source lang="python"> | ||
mset 1 x200 -78 -2 -78 -2 -78 x200 79 -156 157 x200 -234 235 x400 | mset 1 x200 -78 -2 -78 -2 -78 x200 79 -156 157 x200 -234 235 x400 | ||
// mset 1 x200 makes the first state last for 200 frames | |||
// -78 -2 takes us FROM state 1 to 78, then back to frame 2. I've repeated this for dramatic effect | |||
// then we pause at 78 for 200 frames, then go from 79-156 and pause at 157 for 200 frames, etc. | |||
</source> | </source> | ||
Revision as of 13:51, 17 March 2010
mset sets up a relationship between molecular states and movie frames. This makes it possible to control which states are shown in which frame.
USAGE
mset specification [ ,frame ]
PYMOL API
cmd.mset( string specification [, int frame] )
EXAMPLES
mset 1 // simplest case, one state -> one frame
mset 1 x10 // ten frames, all corresponding to state 1
mset 1 x30 1 -15 15 x30 15 -1
// more realistic example:
// the first thirty frames are state 1
// the next 15 frames pass through states 1-15
// the next 30 frames are of state 15
// the next 15 frames iterate back to state 1
mset 1 x200 -78 -2 -78 -2 -78 x200 79 -156 157 x200 -234 235 x400
// mset 1 x200 makes the first state last for 200 frames
// -78 -2 takes us FROM state 1 to 78, then back to frame 2. I've repeated this for dramatic effect
// then we pause at 78 for 200 frames, then go from 79-156 and pause at 157 for 200 frames, etc.
cmd.mset("1 -%d" % cmd.count_states())
// this will create a one-to-one mapping of states to movie frames. useful for making movies from trajectory files.