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Revision as of 14:46, 17 November 2009


Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
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Warren News about Warren DeLano's passing may be read on Warren's memorial page.
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PyMOL PyMOL is known to work under Mac OS X 10+ (Snow Leopard) using the new Fink and incentive builds. See Installing PyMOL under Fink.
PyMOL PyMOL now has a Set command for basic settings, and a Set_bond command for bond-only settings.
PyMOL Space— new command to control PyMOL's usage of color spaces.
Do you know this PyMOL command...

HighlightAlignedSS

Highlight ss1.png

This script will align and color the paired secondary structures of the two proteins a similar rainbow color.


<source lang="python"> from pymol import cmd, util

def highlight_aligned_ss(obj1,obj2,transform=1,quiet=1):

   """

DESCRIPTION

    ..→
A Random PyMOL-generated Cover. See Covers.
Random PyMOL-generated Journal Cover