Show hydrophobics: Difference between revisions
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(PyMOL script to display hydrophobic sidechains) |
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<source lang="python"> | |||
# | |||
# | |||
# | # | ||
# Show side chain sticks for hydrophobic residues | # Show side chain sticks for hydrophobic residues | ||
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color orange,hydrophobes | color orange,hydrophobes | ||
disable hydrophobes | disable hydrophobes | ||
set cartoon_smooth_loops,0 | set cartoon_smooth_loops,0</source> | ||
Revision as of 19:14, 7 March 2005
#
#
#
# Show side chain sticks for hydrophobic residues
#
# (script for PyMol)
# Tom Stout, 08/05/2004
#
mstop
dss
hide all
#zoom all
#orient
show cartoon,all
color gray,all
select hydrophobes,(resn ala+gly+val+ile+leu+phe+met)
show sticks, (hydrophobes and (!name c+n+o))
color orange,hydrophobes
disable hydrophobes
set cartoon_smooth_loops,0