Read Molstr: Difference between revisions
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==DESCRIPTION== | |||
'''read_molstr''' reads an MDL MOL format file as a string | '''read_molstr''' reads an MDL MOL format file as a string | ||
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===NOTES=== | ===NOTES=== | ||
'''state''' is a 1-based state index for the object, or 0 to append. | *'''state''' is a 1-based state index for the object, or 0 to append. | ||
'''finish''' is a flag (0 or 1) which can be set to zero to improve performance when loading large numbers of objects, but you must call '''finish_object''' when you are done. | * '''finish''' is a flag (0 or 1) which can be set to zero to improve performance when loading large numbers of objects, but you must call '''finish_object''' when you are done. | ||
'''discrete''' is a flag (0 or 1) which tells PyMOL that there will be no overlapping atoms in the file being loaded. '''discrete''' objects save memory but can not be edited. | * '''discrete''' is a flag (0 or 1) which tells PyMOL that there will be no overlapping atoms in the file being loaded. '''discrete''' objects save memory but can not be edited. | ||
[[Category:Commands|read_molstr]] | [[Category:Commands|read_molstr]] | ||
Revision as of 14:53, 24 February 2007
DESCRIPTION
read_molstr reads an MDL MOL format file as a string
PYMOL API ONLY
cmd.read_molstr( string molstr, string name, int state=0, \
int finish=1, int discrete=1 )
NOTES
- state is a 1-based state index for the object, or 0 to append.
- finish is a flag (0 or 1) which can be set to zero to improve performance when loading large numbers of objects, but you must call finish_object when you are done.
- discrete is a flag (0 or 1) which tells PyMOL that there will be no overlapping atoms in the file being loaded. discrete objects save memory but can not be edited.