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| [https://pymol.org/fellowship New PyMOL fellows announced for 2018-2019]
| [https://pymol.org/fellowship New PyMOL fellows announced for 2022-2023]
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Revision as of 21:32, 15 July 2022

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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.5 has been released on May 10, 2021.
Python 3 New Python 3 compatibility guide for scripts and plugins
POSF New PyMOL fellows announced for 2022-2023
Tutorial Plugins Tutorial updated for PyQt5
New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

Grid slot

== Overview ==

Sets the grid slot location for a given object.

Syntax

set grid_slot, int, obj

where int is the number of the grid slot and obj is the object to put there.

Additionally, multiple objects can be assigned to the same grid slot by simply specifying different objects to the same grid slot. For example, if you have four objects loaded into PyMOL (A, B, C, D) and you want to show objects A and B in one slot while C and D are in another. Object E is shown in all slots by setting slot to -2:

set grid_slot, 1, A
set grid_slot, 1, B
set grid_slot, 2, C
set grid_slot, 2, D
set grid_slot, -2, E

One use for this representation is in the context of structure prediction/validation (CASP) where you may want to show how your structure looks with respect to the native strucutre versus how somebody else's structure looks with respect to the native. Using grid_slot (as shown) will allow for a clearer, side-by-side comparison rather than the ..→

A Random PyMOL-generated Cover. See Covers.