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|+ style="font-size: 1.4em; font-weight: bold; text-align:left; border-bottom: 2px solid #6678b1;" | News & Updates
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| [https://pymol.org PyMOL v2.3 has been released] on February 11, 2019.
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| [[Plugins Tutorial]] updated for PyQt5
| [[Plugins Tutorial]] updated for PyQt5
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| [https://pymol.org PyMOL v2.2 has been released] on July 24, 2018.
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Revision as of 10:18, 11 February 2019

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Welcome to the PyMOL Wiki!
The community-run support site for the PyMOL molecular viewer.
To request a new account, email SBGrid at: accounts (@) sbgrid dot org
Quick Links
Tutorials Table of Contents Commands
Script Library Plugins FAQ
Gallery | Covers PyMOL Cheat Sheet (PDF) Getting Help
News & Updates
Official Release PyMOL v2.3 has been released on February 11, 2019.
POSF New PyMOL fellows announced for 2018-2019
Tutorial Plugins Tutorial updated for PyQt5
New Plugin ProBiS H2O is a new plugin for identification of conserved waters in protein structures.
Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll!
Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL
New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons
Older News See Older News.
Did you know...

Fetch Path

Fetch_Path sets the default path that PyMOL uses to load files from before it tries to download them from the PDB.

Details

If you have a local copy of the PDB on your machine, say in directory /spc/pdb then, once you set Fetch_Path to that directory the fetch command will look in /spc/pdb before going to the PDB for your file. Also, the files fetched from the PDB are stored here once downloaded. PyMOL will only look for files starting with the pdb code in lower case.

Examples

On Linux or MacOS:

set fetch_path, /spc/pdb

On Windows:

set fetch_path, D:\mypdbs

Using ~/fetch_path:

cmd.set('fetch_path', cmd.exp_path('~/fetch_path'), quiet=0)

Hints

Put this in your pymolrc to make it permanent.

See Also

A Random PyMOL-generated Cover. See Covers.