Pdb use ter records: Difference between revisions
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Hongbo zhu (talk | contribs) (create page about parameter pdb_use_ter_records) |
Hongbo zhu (talk | contribs) |
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get pdb_use_ter_records # return current value of pdb_use_ter_records | get pdb_use_ter_records # return current value of pdb_use_ter_records | ||
set pdb_use_ter_records, 0 | set pdb_use_ter_records, 0 | ||
import cmd | |||
cmd.set(name='pdb_use_ter_records', value=0) # same effect | |||
</source> | </source> | ||
Revision as of 06:09, 22 October 2012
When a molecule (e.g. a protein molecule) is saved in pdb format by PyMOL, a line of TER record is inserted wherever the residue id is not sequential. To suppress this feature, set pdb_use_ter_records value to 0 before saving protein molecules.
Example
get pdb_use_ter_records # return current value of pdb_use_ter_records
set pdb_use_ter_records, 0
import cmd
cmd.set(name='pdb_use_ter_records', value=0) # same effect