Get Names: Difference between revisions
Jump to navigation
Jump to search
mNo edit summary |
(Updating argument list) |
||
| (13 intermediate revisions by 5 users not shown) | |||
| Line 1: | Line 1: | ||
'''get_names''' returns a list of object and/or selection names. | '''get_names''' returns a list of object and/or selection names. | ||
===PYMOL API=== | ===PYMOL API=== | ||
<source lang="python"> | <source lang="python"> | ||
cmd.get_names( | cmd.get_names(type,enabled_only,selection) | ||
</source> | </source> | ||
===ARGUMENTS=== | |||
* '''type : string''' determines the type of objects to be returned. It can take any of the following values: | |||
** '''objects''' Structure objects | |||
** '''selections''' All selection | |||
** '''all''' Objects and Selections | |||
** '''public_objects''' (default) | |||
** '''public_selections''' | |||
** '''public_nongroup_objects''' | |||
** '''public_group_objects''' | |||
** '''nongroup_objects''' | |||
** '''group_objects''' | |||
* '''enabled_only : boolean''' If 1, only enabled objects are returned. Default 0 (all objects) | |||
* '''selection''' | |||
===NOTES=== | ===NOTES=== | ||
The default behavior is to return only object names. | The default behavior is to return only object names. | ||
| Line 15: | Line 27: | ||
# structure align all proteins in PyMOL to the protein named "PROT". Effectively a | # structure align all proteins in PyMOL to the protein named "PROT". Effectively a | ||
# poor multiple method for multiple structure alignment. | # poor multiple method for multiple structure alignment. | ||
for x in cmd.get_names(" | for x in cmd.get_names("all"): cealign( "PROT", x) | ||
</source> | </source> | ||
Determine whether or not an object (objName) is enabled: | |||
<source lang="python"> | |||
if objName in cmd.get_names(enabled_only=1): | |||
print objName, "is enabled" | |||
</source> | |||
===SEE ALSO=== | ===SEE ALSO=== | ||
[[ | [[get_type]], [[get_names_of_type]], [[count_atoms]], [[count_states]] | ||
[[Category:Commands|Get Names]] | [[Category:Commands|Get Names]] | ||
Latest revision as of 10:31, 19 February 2016
get_names returns a list of object and/or selection names.
PYMOL API
cmd.get_names(type,enabled_only,selection)
ARGUMENTS
- type : string determines the type of objects to be returned. It can take any of the following values:
- objects Structure objects
- selections All selection
- all Objects and Selections
- public_objects (default)
- public_selections
- public_nongroup_objects
- public_group_objects
- nongroup_objects
- group_objects
- enabled_only : boolean If 1, only enabled objects are returned. Default 0 (all objects)
- selection
NOTES
The default behavior is to return only object names.
EXAMPLES
Multiple alignments
# structure align all proteins in PyMOL to the protein named "PROT". Effectively a
# poor multiple method for multiple structure alignment.
for x in cmd.get_names("all"): cealign( "PROT", x)
Determine whether or not an object (objName) is enabled:
if objName in cmd.get_names(enabled_only=1):
print objName, "is enabled"