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News & Updates New Setup PyMOL-open-source-windows-setup v3.1 has been released on January 20, 2025. More information under Windows Install. New Plugin PySSA aims to combine PyMOL and ColabFold to enable the prediction and analysis of 3D protein structures for the scientific end-user. v1.0 has been released on July 10, 2024. Official Release PyMOL v3.0 has been released on March 12, 2024. New Plugin CavitOmiX calculate Catalophore™ cavities, predict protein structures with OpenFold by NVIDIA-BioNeMo, ESMFold and retrieve Alphafold models Official Release PyMOL v2.5 has been released on May 10, 2021. Python 3 New Python 3 compatibility guide for scripts and plugins POSF New PyMOL fellowship announced for 2022-2023 Tutorial Plugins Tutorial updated for PyQt5 New Plugin PICv is a new plugin for clustering protein-protein interactions and visualization with available data from PDBe Selection keywords New polymer.protein and polymer.nucleic selection keywords. Thanks everyone who participated in the poll! Plugin Update MOLE 2.5 is an updated version of channel analysis software in PyMOL New Script dssr_block is a wrapper for DSSR (3dna) and creates block-shaped nucleic acid cartoons Older News See Older News.

Did you know... Gyration tensor Type PyMOL Plugin Download http://emptyewer.github.io/Gyration_tensor Author(s) Venkatramanan Krishnamani License - Introduction This program calculates and visualizes the gration tensors of a protein (based on geometry) for each chain in the PDB file. How to get it git clone https://github.com/emptyewer/Gyration_tensor.git Required Dependencies on Linux and Mac OS X Tkinter and Numpy sudo apt-get install python-tk python-numpy Installing on Linux Navigate to plugins > install Locate the downloaded gyration_tensor.py file in the dialogbox and select 'OK' Quit and Restart 'pymol' Usage Launch PyMOL Navigate to Plugins > Contact Map Visualizer in PyMOL When the first dialog box pops up, select PDB file and select 'OK'. The plugin calculates and outputs the Magnitude and Direction of the tensors in the debug window and draws the ..→

A Random PyMOL-generated Cover. See Covers.