PoseView: Difference between revisions
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{{Infobox script-repo | {{Infobox script-repo | ||
|type = module | |type = module | ||
|filename = poseview.py | |filename = scripts/poseview.py | ||
|author = [[User:Speleo3|Thomas Holder]] | |author = [[User:Speleo3|Thomas Holder]] | ||
|license = BSD-2-Clause | |license = BSD-2-Clause | ||
Line 21: | Line 21: | ||
== Usage == | == Usage == | ||
poseview [ ligand [, protein [, width [, height [, exe [, state ]]]]]] | poseview [ ligand [, protein [, width [, height [, filename [, exe [, state ]]]]]]] | ||
== Example == | == Example == |
Latest revision as of 22:50, 22 June 2025
Type | Python Module |
---|---|
Download | scripts/poseview.py |
Author(s) | Thomas Holder |
License | BSD-2-Clause |
This code has been put under version control in the project Pymol-script-repo |
poseview is a PyMOL wrapper for the PoseView program. PoseView generates 2D structure-diagrams of protein-ligand complexes.
Setup
You need the poseview executable and a valid license file. Example for a launcher script which should be saved to /usr/bin/poseview so that PyMOL can find it:
#!/bin/sh
POSEVIEW_PATH="/opt/poseview-1.1.2-Linux-x64"
export BIOSOLVE_LICENSE_FILE="$POSEVIEW_PATH/poseview.lic"
exec "$POSEVIEW_PATH/poseview" "$@"
Usage
poseview [ ligand [, protein [, width [, height [, filename [, exe [, state ]]]]]]]
Example
fetch 1a00, async=0
poseview chain C and resn HEM