Update: Difference between revisions

Latest revision as of 01:33, 24 January 2018

update transfers coordinates from one selection to another.

update (target-selection),(source-selection)

cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] )

matchmaker = integer: how to match atom pairs {default: 1}
- 0: assume that atoms are stored in the identical order
- 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt)
- 2: match based on ID
- 3: match based on rank
- 4: match based on index

Note that the meaning of matchmaker=0 differs in update and fit (also rms, rms_cur, ...)!

update target,(variant)

Currently, this applies across all pairs of states. Fine control will be added later.

@@ Line 1: / Line 1: @@
-===DESCRIPTION===
+'''update''' transfers coordinates from one selection to another.
-   "update" transfers coordinates from one selection to another.
 ===USAGE===
-    update (target-selection),(source-selection)
+ update (target-selection),(source-selection)
+===PYMOL API===
+<source lang="python">
+cmd.update( target ,source [,target_state=0 [,source_state=0 [,matchmaker=1 [,quiet=1 [,_self=cmd ]]]]]] )
+</source>
+=== ARGUMENTS ===
+* '''matchmaker''' = integer: how to match atom pairs {default: 1}
+** 0: assume that atoms are stored in the identical order
+** 1: match based on all atom identifiers (segi,chain,resn,resi,name,alt)
+** 2: match based on ID
+** 3: match based on rank
+** 4: match based on index
+''Note that the meaning of matchmaker=0 differs in [[update]] and [[fit]] (also [[rms]], [[rms_Cur|rms_cur]], ...)!''
 ===EXAMPLES===
-    update target,(variant)
+ update target,(variant)
 ===NOTES===
-    Currently, this applies across all pairs of states.  Fine
+Currently, this applies across all pairs of states.  Fine  control will be added later.
-   control will be added later.
 ===SEE ALSO===
-    [[Cmd load]]
+[[Cmd load]]
-[[Category:Commands|load]]
+[[Category:Commands|Update]]