MSMS: Difference between revisions

From PyMOLWiki
Jump to navigation Jump to search
(See Also)
 
(6 intermediate revisions by one other user not shown)
Line 6: Line 6:
}}
}}


= Introduction =
[http://mgltools.scripps.edu/packages/MSMS/ MSMS] is an excellent tool for computing protein solvent excluded surface (SES). MSMS Plugin for PyMOL provides a graphical user interface for running MSMS and displaying its results in PyMOL. See the original site (not updated anymore) for more details: [http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html MSMS Plugin for PyMOL]
[http://mgltools.scripps.edu/packages/MSMS/ MSMS] is an excellent tool for computing protein solvent excluded surface (SES). MSMS Plugin for PyMOL provides a graphical user interface for running MSMS and displaying its results in PyMOL. Most recent MSMS Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/msms.py this link].


Only works in Linux, since '''pdb_to_xyzrn''' is a shell script. Windows users please contact author for a script replacing '''pdb_to_xyzrn'''.
Most recent MSMS Plugin code can be obtained from [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/msms.py this link].


= External links =
== External links ==
[[File:Example.png|400px|thumb|right|Demonstration of MSMS plugin.]]
[[File:Example.png|400px|thumb|right|Demonstration of MSMS plugin.]]
* [http://www.netsci.org/Science/Compchem/feature14e.html Molecular Surfaces]
* [http://en.wikipedia.org/wiki/Molecular_surface Molecular Surfaces]
* Most recent code on github: [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/msms.py MSMS Plugin for PyMOL @ GitHub]
* Most recent code on github: [https://github.com/hongbo-zhu-cn/Pymol-script-repo/blob/master/plugins/msms.py MSMS Plugin for PyMOL @ GitHub]
* Original site (not updated anymore): [http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html MSMS Plugin for PyMOL]
* Original site (not updated anymore): [http://www.biotec.tu-dresden.de/~hongboz/msms_pymol/msms_pymol.html MSMS Plugin for PyMOL]
== See Also ==
* [[msms_surface]] (psico)


[[Category:Plugins]]
[[Category:Plugins]]
[[Category:Pymol-script-repo]]
[[Category:Pymol-script-repo]]

Latest revision as of 02:04, 18 October 2017

Type PyMOL Plugin
Download plugins/msms.py
Author(s) Hongbo Zhu
License -
This code has been put under version control in the project Pymol-script-repo

MSMS is an excellent tool for computing protein solvent excluded surface (SES). MSMS Plugin for PyMOL provides a graphical user interface for running MSMS and displaying its results in PyMOL. See the original site (not updated anymore) for more details: MSMS Plugin for PyMOL

Most recent MSMS Plugin code can be obtained from this link.

External links

Demonstration of MSMS plugin.

See Also